User:Aritalab/Internal/Seminar

An introduction to stochastic processes with applications to biology (2011 April~)

• S2 Discrete-Time Markov Chains
  • Arita
• S3 Biological Applications of Discrete-Time Markov Chains
  • Kohata
  • Shiraishi
• S4 Discrete-Time Branching Processes
  • Takemoto
• S5 Continuous-Time Markov Chains
  • Hasegawa
• S6 Continuous-Time Birth and Death Chains
  • Arita (6.1-6.5)
  • Hasegawa (6.6-)
• S7 Biological Applications of Continuous-Time Markov Chains
  • Kohata (7.1-7.3)
  • Hasegawa (7.4-7.6)
    • PPT
    • Gillespie algorithm in Mathematica (NB)
    • Gillespie algorithm in Mathematica (PDF)
  • Hasegawa (7.7-7.8)
    • PPT
• S8 Diffusion Processes and Stochastic Differential Equations
  • Arita (8.1-8.5)
  • Hasegawa (8.6-8.7)
• S9 Biological Applications of Stochastic Differential Equations

Ideal, Varieties, and Algorithms (2012 July~)

• Chapter 1
  • §1 Chichii
  • §2 Kohata
  • §3 Hasegawa
  • §4 Arita
  • §5 Sato

• Chapter 2
  • §1 Chichii
  • §2 Kohata
  • §3 Hasegawa
  • §4 Arita
  • §5 Sato
  • §6
  • §7
  • §8
  • §9

• Chapter 3