P450:CYP90
From Metabolomics.JP
(Difference between revisions)
(New page: =90 Family= {{P450/Table/Header| {{#repeat:P450/Table/Row|1| &&CYP90A1&&Arabidopsis thaliana&&GenEMBL X87367 mRNA (1608bp) GenEMBL X87368 gene (4937bp) &&CYP90A1&&Arabidopsis thaliana&&Ge...) |
(New page: =90 Family= {{P450/Table/Header| {{#repeat:P450/Table/Row|1| &&CYP90A1&&Arabidopsis thaliana&&GenEMBL X87367 mRNA (1608bp) GenEMBL X87368 gene (4937bp) &&CYP90A1&&Arabidopsis thaliana&&Ge...) |
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&&CYP90A1&&Arabidopsis thaliana&&GenEMBL X87367 mRNA (1608bp) GenEMBL X87368 gene (4937bp) | &&CYP90A1&&Arabidopsis thaliana&&GenEMBL X87367 mRNA (1608bp) GenEMBL X87368 gene (4937bp) | ||
&&CYP90A1&&Arabidopsis thaliana&&GenEMBL AB005237 comp(27500-23500) region | &&CYP90A1&&Arabidopsis thaliana&&GenEMBL AB005237 comp(27500-23500) region | ||
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&&CYP90E4&&Selaginella lepidophylla&&BM402225.1 | &&CYP90E4&&Selaginella lepidophylla&&BM402225.1 | ||
&&CYP90F1&&Selaginella moellendorffii (lycopod moss)&&Confidential | &&CYP90F1&&Selaginella moellendorffii (lycopod moss)&&Confidential | ||
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}} | }} | ||
Latest revision as of 20:00, 21 June 2009
| P450 Top (P450トップ) |
P450 Index (P450一覧) |
Arabidopsis (シロイヌナズナ) |
Oryza (イネ) |
Species-sequence information is taken from Cytochrome P450 Homepage by Dr. Nelson. (last update 2009/06/20)
[edit] 90 Family
| ID | Species | Family | Order | Description
|
|---|---|---|---|---|
| CYP90A1 | Brassicaceae | Brassicales | GenEMBL X87367 mRNA (1608bp) GenEMBL X87368 gene (4937bp) | |
| CYP90A1 | Brassicaceae | Brassicales | GenEMBL AB005237 comp(27500-23500) region | |
| CYP90A2 |
|
Fabaceae | Fabales | GenEMBL AF279252 |
| CYP90A3 |
|
Poaceae | Poales | AC123526.1 $F CYP90A3 chr 11 60% to 90A1 2 diffs with aaaa01015179.1 |
| CYP90A4 |
|
Poaceae | Poales | aaaa01034672.1 CYP90A4 (indica cultivar-group) 56% to 90A1 89% to 90A3 AC123526.1 |
| CYP90A5 |
|
Solanaceae | Solanales | No accession number |
| CYP90A5 |
|
Solanaceae | Solanales | GenEMBL BT014380 |
| CYP90A6 |
|
Salicaceae | Malpighiales | CYP90A6P Populus trichocarpa (black cottonwood) |
| CYP90A7 |
|
Salicaceae | Malpighiales | |
| CYP90A8 |
|
Rutaceae | Sapindales | GenEMBL CB291543.1 CB291544.1 BQ623112.1 |
| CYP90A8 | Rutaceae | Sapindales | GenEMBL DQ001728.1 | |
| CYP90A9 |
|
Fabaceae | Fabales | No accession number |
| CYP90A10 |
|
Fabaceae | Fabales | No accession number |
| CYP90A11 | Asteraceae | Asterales | GenEMBL AB231153 | |
| CYP90A12 | Asteraceae | Asterales | GenEMBL AB231154 | |
| CYP90A13 | Asteraceae | Asterales | GenEMBL DQ363132.1 | |
| CYP90A14 |
|
Fabaceae | Fabales | GenEMBL BF642437.1, CX526586.1, CX520194.1, BI263183.1 |
| CYP90A14 |
|
Fabaceae | Fabales | DQ340246, EST BU577443, BQ295944, BQ080340 |
| CYP90A14 |
|
Fabaceae | Fabales | No accession number |
| CYP90A15 | Solanaceae | Solanales | AJ438489 | |
| CYP90A16 |
|
Vitaceae | Vitales | AM463180 |
| CYP90A17 | Caricaceae | Brassicales | supercontig_19:1304719..1308549 | |
| CYP90A18 |
|
Pinaceae | Coniferales | EX411154, EX409235, EX441953, EX408414 |
| CYP90A19 |
|
Poaceae | Poales | AB206581.1 |
| CYP90A20 |
|
Fabaceae | Fabales | No accession number |
| CYP90A20 |
|
Fabaceae | Fabales | EST BU081866, CO979079.1 |
| CYP90A21 |
|
Poaceae | Poales | DV169686.1, DV026887.1, EE028995.2, DV523152.1 |
| CYP90A22v1 |
|
Poaceae | Poales | EE166033.2, EE157573.2, EE152605.2, FL141773.1 |
| CYP90A22v2 |
|
Poaceae | Poales | EU970067 |
| CYP90A23 |
|
Fabaceae | Fabales | JGI Glyma0 assmbly scaffold_121 |
| CYP90A24 |
|
Fabaceae | Fabales | JGI Glyma0 assmbly scaffold_252:66122..59954 (- strand) |
| CYP90A25 |
|
Pinaceae | Coniferales | No accession number |
| CYP90A25 |
|
Pinaceae | Coniferales | No accession number |
| CYP90A26 |
|
Pinaceae | Coniferales | No accession number |
| CYP90A |
|
Rosaceae | Rosales | GenEMBL DY667353.1 EST |
| CYP90A |
|
Cycadaceae | Cycadales | GenEMBL DR061491 EX922059.1 |
| CYP90A |
|
Cycadaceae | Cycadales | EX923965.1 |
| CYP90A (frag.) |
|
Platanaceae | Proteales | DQ402937 |
| CYP90A |
|
Ericaceae | Ericales | CV014946.1 68% to 90A3, 76% to 90A1 |
| CYP90A |
|
Polemoniaceae | Ericales | DT575655 80% to 90A1 |
| CYP90A |
|
Grossulariaceae | Saxifragales | CV458372.1 |
| CYP90A |
|
Poaceae | Poales | GenEMBL AA961302 (626bp) |
| CYP90A |
|
Asteraceae | Asterales | DW118012.1 |
| CYP90A |
|
Ranunculaceae | Ranunculales | DT727358.1 |
| CYP90A |
|
Malvaceae | Malvales | DT554036.1 |
| CYP90A |
|
Plantaginaceae | Lamiales | AJ568460 |
| CYP90A |
|
Rubiaceae | Gentianales | CB079077.1 |
| CYP90A |
|
Ericaceae | Ericales | CV014946.1 |
| CYP90A |
|
Myrtaceae | Myrtales | DR409993.1 |
| CYP90A |
|
Amaranthaceae | Caryophyllales | BQ584082.1 |
| CYP90A |
|
Cucurbitaceae | Cucurbitales | AM715243.1 77% to 90A1 |
| CYP90A |
|
Magnoliaceae | Magnoliales | FD497898.1 75% to 90A1 Arab |
| CYP90A |
|
Pteridaceae | Polypodiales | BP916923.1 |
| CYP90B1 | Brassicaceae | Brassicales | GenEMBL AF044216 also AL132979 | |
| CYP90B2 |
|
Poaceae | Poales | AC104473.1 $F CYP90B2 chromosome 3 clone OJ1626B05, Length 127982 |
| CYP90B2 |
|
Poaceae | Poales | aaaa01002757.1 CYP90B2 (indica cultivar-group) orth of AC104473.1 chr 3 77% to 90B |
| CYP90B3 |
|
Solanaceae | Solanales | No accession number |
| CYP90B4 |
|
Salicaceae | Malpighiales | GenEMBL EST BU887383 root cDNA library cDNA |
| CYP90B5 |
|
GenEMBL EST CD483534 cDNA clone | ||
| CYP90B6 |
|
Salicaceae | Malpighiales | |
| CYP90B7 |
|
Salicaceae | Malpighiales | CYP90B7P Populus trichocarpa (black cottonwood) |
| CYP90B8 |
|
Fabaceae | Fabales | No accession number |
| CYP90B9 | Asteraceae | Asterales | GenEMBL AB231155.1 | |
| CYP90B10 |
|
Fabaceae | Fabales | GenEMBL AC147964.10 GenPept ABE78866, ABE78867 |
| CYP90B11 |
|
Fabaceae | Fabales | GenEMBL CT033768.1 |
| CYP90B12 |
|
Vitaceae | Vitales | AM441474.1 |
| CYP90B13 | Caricaceae | Brassicales | supercontig_6:791125,793880 | |
| CYP90B14v1 |
|
Poaceae | Poales | EE156534.2, CA452603.1, EE156535.2 (ESTs) |
| CYP90B14v2 |
|
Poaceae | Poales | EU957115 |
| CYP90B15 |
|
Fabaceae | Fabales | JGI Glyma0 assembly scaffold_53:3506499..3501913 (- strand) |
| CYP85clan |
|
Pteridaceae | Polypodiales | BP920462 |
| CYP90B |
|
Alliaceae | Asparagales | CF447019 |
| CYP90B | GenEMBL CD483534 EST | |||
| CYP90B | GenEMBL CV011348 | |||
| CYP90C1 | Brassicaceae | Brassicales | GenEMBL Z99708 | |
| CYP90C1 | Brassicaceae | Brassicales | GenEMBL AL022141 | |
| CYP90C1 | Brassicaceae | Brassicales | GenEMBL AB008097 | |
| CYP90C2 |
|
Solanaceae | Solanales | No accession number |
| CYP90C |
|
Convolvulaceae | Solanales | CX793242 |
| CYP90C3 |
|
Salicaceae | Malpighiales | |
| CYP90C4 |
|
Fabaceae | Fabales | GenEMBL AC146720.23 GenPept ABE89648, ABE89647 |
| CYP90C5 |
|
Vitaceae | Vitales | AM429218 |
| CYP90C6 | Caricaceae | Brassicales | supercontig_6:1503524,1513523 with a short seq. gap | |
| CYP90C7P |
|
Vitaceae | Vitales | CAAP02000141.1 pseudogene |
| CYP90C8 |
|
Fabaceae | Fabales | JGI Glyma0 assembly scaffold_53:3113778..3119234 (+ strand) |
| CYP90C9 |
|
Fabaceae | Fabales | JGI Glyma0 assembly scaffold_13:5087589..5094210 (+ strand) corrected |
| CYP90C |
|
Araliaceae | Apiales | DV553829 |
| CYP90D1 | Brassicaceae | Brassicales | GenEMBL AP001307 comp(43183-45689) | |
| CYP90D2 |
|
Poaceae | Poales | CYP90D3 Oryza sativa (rice) |
| CYP90D4P |
|
Poaceae | Poales | |
| CYP90D5 |
|
Salicaceae | Malpighiales | CYP90D6 Populus trichocarpa (black cottonwood) |
| CYP90D7 |
|
Fabaceae | Fabales | AB277551 |
| CYP90D8 |
|
Vitaceae | Vitales | AM482768.1 |
| CYP90D9 | Caricaceae | Brassicales | supercontig_25:785326,787771 | |
| CYP90D10.a |
|
Poaceae | Poales | AC204363.3 |
| CYP90D10.b |
|
Poaceae | Poales | AC195903.3 |
| CYP90D10.b |
|
Poaceae | Poales | EU958503 |
| CYP90D11 |
|
Poaceae | Poales | DV519605.1, FL052263.1, FL456676.1, EB673391.1 ESTs |
| CYP90D12 |
|
Fabaceae | Fabales | JGI Glyma0 assembly scaffold_146:1181331..1185409 (+ strand) |
| CYP90D13 |
|
Fabaceae | Fabales | JGI Glyma0 assembly scaffold_107:2625813..2621530 (- strand) |
| CYP90D14 |
|
Poaceae | Poales | EF025184 |
| CYP90D15 |
|
Pinaceae | Coniferales | No accession number |
| CYP90C/90D (precursor) |
|
Pinaceae | Coniferales | DR101063 |
| CYP90C/90D (precursor) | Pinaceae | Coniferales | EX390090.1 mid to PKG motif | |
| CYP90C/90D (precursor) | Pinaceae | Coniferales | DR541349.1 C-term | |
| CYP90C/90D (precursor) |
|
Cupressaceae | Coniferales | BY880850 N-term |
| CYP90C/90D (precursor) |
|
Cupressaceae | Coniferales | BW996624 C-term |
| CYP90E1 | Selaginellaceae | Selaginellales | Traces 721005955 914792662 1322561598 869252186 | |
| CYP90E2 |
|
Selaginellaceae | Selaginellales | Confidential |
| CYP90E3 |
|
Selaginellaceae | Selaginellales | Confidential |
| CYP90E4 | Selaginellaceae | Selaginellales | BM402225.1 | |
| CYP90F1 |
|
Selaginellaceae | Selaginellales | Confidential
|
[edit] Functions
- CYP90A, steroid 23-alpha-hydroxylase
- CYP90A, steroid 22-alpha-hydroxylase
- CYP90D, brassinosteroid C-3 oxidase
[edit] Links
- CYPedia CYP90 Functional Prediction (Cytochrome P450 Expression Database using Arabidopsis) by IBMP Strasbourg.
