P450:CYP88
From Metabolomics.JP
(Difference between revisions)
(New page: =88 Family= {{P450/Table/Header| {{#repeat:P450/Table/Row|1| &&CYP88A1&&Zea mays&&GenEMBL U32579 (1724bp) EE170745.1 EST &&CYP88A2&&Cucurbita maxima (pumpkin)&&GenEMBL AF212991 &&CYP88A3&...) |
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=88 Family= | =88 Family= | ||
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&&CYP88A1&&Zea mays&&GenEMBL U32579 (1724bp) EE170745.1 EST | &&CYP88A1&&Zea mays&&GenEMBL U32579 (1724bp) EE170745.1 EST | ||
&&CYP88A2&&Cucurbita maxima (pumpkin)&&GenEMBL AF212991 | &&CYP88A2&&Cucurbita maxima (pumpkin)&&GenEMBL AF212991 | ||
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&&CYP88D1&&Medicago truncatula (barrel medic, Fabales)&&GenEMBL AC144538.23 GenPept ABE91093 | &&CYP88D1&&Medicago truncatula (barrel medic, Fabales)&&GenEMBL AC144538.23 GenPept ABE91093 | ||
&&CYP88D2&&Medicago truncatula (barrel medic, Fabales)&&ESTs EV261217.1, AL380946.1, AL375640.1 | &&CYP88D2&&Medicago truncatula (barrel medic, Fabales)&&ESTs EV261217.1, AL380946.1, AL375640.1 | ||
| − | &&CYP88D3&&Medicago truncatula (barrel medic, Fabales)&&ESTs BF639404.1 | + | &&CYP88D2&&Glycyrrhiza uralensis/glabra (licorice)&& AB433175 |
| + | &&CYP88D3&&Medicago truncatula (barrel medic, Fabales)&&ESTs BF639404.1 | ||
| + | &&CYP88D3&&Glycyrrhiza uralensis/glabra (licorice)&& AB433176 | ||
&&CYP88D4&&Lotus japonicus&&No accession number | &&CYP88D4&&Lotus japonicus&&No accession number | ||
| + | &&CYP88D4&&Glycyrrhiza uralensis/glabra (licorice)&& AB433177 | ||
&&CYP88D5&&Lotus japonicus&&No accession number | &&CYP88D5&&Lotus japonicus&&No accession number | ||
| − | &&CYP88D6&&Glycyrrhiza uralensis (licorice)&& | + | &&CYP88D5&&Glycyrrhiza uralensis/glabra (licorice)&& AB433178 |
| + | &&CYP88D6&&Glycyrrhiza uralensis/glabra (licorice)&& AB433179 | ||
&&CYP88E1&&Selaginella moellendorffii&&traces 720209121, 914912278, 964564232, 915149048, | &&CYP88E1&&Selaginella moellendorffii&&traces 720209121, 914912278, 964564232, 915149048, | ||
&&CYP88E2&&Selaginella moellendorffii (lycopod moss)&&Confidential | &&CYP88E2&&Selaginella moellendorffii (lycopod moss)&&Confidential | ||
&&CYP88F1&&Selaginella moellendorffii (lycopod moss)&&Confidential | &&CYP88F1&&Selaginella moellendorffii (lycopod moss)&&Confidential | ||
&&CYP88&&Marchantia polymorpha (liverwort)&&BJ852874.1 47% to 88A4 | &&CYP88&&Marchantia polymorpha (liverwort)&&BJ852874.1 47% to 88A4 | ||
| − | |||
}} | }} | ||
Latest revision as of 22:56, 8 October 2009
| P450 Top (P450トップ) |
P450 Index (P450一覧) |
Arabidopsis (シロイヌナズナ) |
Oryza (イネ) |
Species-sequence information is taken from Cytochrome P450 Homepage by Dr. Nelson. (last update 2009/06/20)
[edit] 88 Family
| ID | Species | Family | Order | Description
|
|---|---|---|---|---|
| CYP88A1 | Poaceae | Poales | GenEMBL U32579 (1724bp) EE170745.1 EST | |
| CYP88A2 |
|
Cucurbitaceae | Cucurbitales | GenEMBL AF212991 |
| CYP88A3 |
|
Brassicaceae | Brassicales | GenEMBL AC000098 |
| CYP88A4 | Brassicaceae | Brassicales | GenEMBL AC005700 | |
| CYP88A5 |
|
Poaceae | Poales | GenEMBL AP000616 Oryza sativa genomic DNA, chromosome 6, clone:P0514G12 |
| CYP88A6 |
|
GenEMBL AF537321 | ||
| CYP88A7 |
|
GenEMBL AF537322 | ||
| CYP88A8 |
|
Salicaceae | Malpighiales | CYP88A9 Populus trichocarpa (black cottonwood) |
| CYP88A10P |
|
Salicaceae | Malpighiales | CYP88A-se1[1:2] Populus trichocarpa (black cottonwood) |
| CYP88A11 |
|
Fabaceae | Fabales | GenEMBL BU761462.1, BM307972.1, CX711236.1, BF598035.1 |
| CYP88A11 |
|
Fabaceae | Fabales | JGI Glyma0 assembly scaffold_159 (-) strand |
| CYP88A12 | Ginkgoaceae | Ginkgoales | GenEMBL AY601886 | |
| CYP88A13 |
|
Fabaceae | Fabales | GenEMBL CR931738.1b |
| CYP88A14 |
|
Fabaceae | Fabales | GenEMBL CR931738.1a |
| CYP88A15 |
|
Poaceae | Poales | GenEMBL AF326277 |
| CYP88A16 | Caricaceae | Brassicales | supercontig_189:278130,280900 with two seq gaps | |
| CYP88A17 | Caricaceae | Brassicales | supercontig_189:283465..287054 | |
| CYP88A18 | Caricaceae | Brassicales | supercontig_189 :288437..291784 (+ strand) | |
| CYP88A19 | Caricaceae | Brassicales | supercontig_189:293331..296295 | |
| CYP88A20 | Caricaceae | Brassicales | supercontig_133:503093,505519 | |
| CYP88A21 | Caricaceae | Brassicales | supercontig_133:713936,711313 | |
| CYP88A22P | Caricaceae | Brassicales | supercontig_2914 :8615,9333 (minus strand) | |
| CYP88A23 |
|
Vitaceae | Vitales | CAAP02003758.1b |
| CYP88A24 |
|
Vitaceae | Vitales | CAAP02003758.1a |
| CYP88A25 |
|
Fabaceae | Fabales | JGI Glyma0 assembly scaffold_223 (-) strand |
| CYP88A26 |
|
Fabaceae | Fabales | scaffold_13 Glyma0 from JGI (-) strand |
| CYP88A27v1 |
|
Pinaceae | Coniferales | No accession number |
| CYP88A27v2 |
|
Pinaceae | Coniferales | No accession number |
| CYP88A28v1 |
|
Pinaceae | Coniferales | No accession number |
| CYP88A28v2 |
|
Pinaceae | Coniferales | No accession number |
| CYP88A29 |
|
Pinaceae | Coniferales | No accession number |
| CYP88A | Solanaceae | Solanales | AB170036.1 | |
| CYP88A |
|
Asteraceae | Asterales | GenEMBL DY934058.1 EST |
| CYP88 |
|
Rutaceae | Sapindales | GenEMBL DY306472.1 EST |
| CYP88 |
|
Malvaceae | Malvales | GenEMBL DT575111.1 EST |
| CYP88A |
|
Actinidiaceae | Ericales | FG492762.1 63% to 88A3 N-term |
| CYP88A |
|
Amaranthaceae | Caryophyllales | BQ582763.1 65% to 88A4 N-term |
| CYP88 |
|
Ranunculaceae | Ranunculales | GenEMBL DR953870.1 EST |
| CYP88 |
|
Juglandaceae | Fagales | GenEMBL CV196173.1 EST |
| CYP88 |
|
Rosaceae | Rosales | GenEMBL EB154488.1 EST |
| CYP88A |
|
EY148209 72% to 88A3 | ||
| CYP88A |
|
Rubiaceae | Gentianales | DV697807.1 68% to 88A4 |
| CYP88 | Pinaceae | Coniferales | GenEMBL DR580069.1 EST | |
| CYP88B1 |
|
Solanaceae | Solanales | GenEMBL ESTs only (lots of ESTs) |
| CYP88C1 |
|
Solanaceae | Solanales | No accession number |
| CYP88D1 |
|
Fabaceae | Fabales | GenEMBL AC144538.23 GenPept ABE91093 |
| CYP88D2 |
|
Fabaceae | Fabales | ESTs EV261217.1, AL380946.1, AL375640.1 |
| CYP88D2 |
|
Fabaceae | Fabales | AB433175 |
| CYP88D3 |
|
Fabaceae | Fabales | ESTs BF639404.1 |
| CYP88D3 |
|
Fabaceae | Fabales | AB433176 |
| CYP88D4 | Fabaceae | Fabales | No accession number | |
| CYP88D4 |
|
Fabaceae | Fabales | AB433177 |
| CYP88D5 | Fabaceae | Fabales | No accession number | |
| CYP88D5 |
|
Fabaceae | Fabales | AB433178 |
| CYP88D6 |
|
Fabaceae | Fabales | AB433179 |
| CYP88E1 | Selaginellaceae | Selaginellales | traces 720209121, 914912278, 964564232, 915149048, | |
| CYP88E2 |
|
Selaginellaceae | Selaginellales | Confidential |
| CYP88F1 |
|
Selaginellaceae | Selaginellales | Confidential |
| CYP88 |
|
Marchantiaceae | Marchantiales | BJ852874.1 47% to 88A4
|
[edit] Functions
- CYP88A, ent-kaurene oxidase, ent-kaurene hydroxylase
[edit] Links
- CYPedia CYP88 Functional Prediction (Cytochrome P450 Expression Database using Arabidopsis) by IBMP Strasbourg.
