P450:CYP83
From Metabolomics.JP
(Difference between revisions)
(New page: =83 Family= The CYP83 family has overlap with the CYP71 family At the low 40% range. 83C1 is 44% identical to 71A1, 43% to 71G1 44% to 71N1 and 45% to 71A9. This family is only found in...) |
(New page: =83 Family= The CYP83 family has overlap with the CYP71 family At the low 40% range. 83C1 is 44% identical to 71A1, 43% to 71G1 44% to 71N1 and 45% to 71A9. This family is only found in...) |
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It is probably more like a CYP71 subfamily than a true family. | It is probably more like a CYP71 subfamily than a true family. | ||
| − | {{P450/Table | + | {{P450/Table| |
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&&CYP83A1&&Arabidopsis thaliana&&GenEMBL U18929 (1551bp) | &&CYP83A1&&Arabidopsis thaliana&&GenEMBL U18929 (1551bp) | ||
&&CYP83A1&&Arabidopsis thaliana&&D78599 (502 amino acids) | &&CYP83A1&&Arabidopsis thaliana&&D78599 (502 amino acids) | ||
| Line 73: | Line 72: | ||
&&CYP83&&Citrus x paradisi (Star Ruby grapefruit, Sapindales)&&GenEMBL DN959456.1 | &&CYP83&&Citrus x paradisi (Star Ruby grapefruit, Sapindales)&&GenEMBL DN959456.1 | ||
&&CYP83&&Gossypium raimondii (Malvales)&&GenMEBL CO107315.1 | &&CYP83&&Gossypium raimondii (Malvales)&&GenMEBL CO107315.1 | ||
| − | |||
}} | }} | ||
Latest revision as of 20:00, 21 June 2009
| P450 Top (P450トップ) |
P450 Index (P450一覧) |
Arabidopsis (シロイヌナズナ) |
Oryza (イネ) |
Species-sequence information is taken from Cytochrome P450 Homepage by Dr. Nelson. (last update 2009/06/20)
[edit] 83 Family
The CYP83 family has overlap with the CYP71 family At the low 40% range. 83C1 is 44% identical to 71A1, 43% to 71G1 44% to 71N1 and 45% to 71A9. This family is only found in the core eudicots It is probably more like a CYP71 subfamily than a true family.
| ID | Species | Family | Order | Description
|
|---|---|---|---|---|
| CYP83A1 | Brassicaceae | Brassicales | GenEMBL U18929 (1551bp) | |
| CYP83A1 | Brassicaceae | Brassicales | D78599 (502 amino acids) | |
| CYP83A1 | Brassicaceae | Brassicales | GenEMBL U69134 | |
| CYP83A1 | Brassicaceae | Brassicales | GenEMBL AL161537 | |
| CYP83A2X | Brassicaceae | Brassicales | D78598 (500 amino acids) also AL080238 | |
| CYP83B1 | Brassicaceae | Brassicales | GENEMBL D78598 (500 amino acids) | |
| CYP83B1 | Brassicaceae | Brassicales | GenEMBL AL161579 | |
| CYP83A2/83B1 |
|
Brassicaceae | Brassicales | AF528175.1 |
| CYP83B1 | Caricaceae | Brassicales | supercontig_26:1706286,1707877 | |
| CYP83C1 |
|
Apiaceae | Apiales | no accession number |
| CYP83 |
|
Lamiaceae | Lamiales | DY322166.1 |
| CYP83 |
|
Aizoaceae | Caryophyllales | BG268880 |
| CYP83 |
|
Rubiaceae | Gentianales | DV706406 DV665110 DV705853 DV712350 |
| CYP83 |
|
Asteraceae | Asterales | DY942686.1 |
| CYP83 |
|
Solanaceae | Solanales | GenEMBL BG889261.1 BG351645.1 mRNA sequence. |
| CYP83C |
|
Solanaceae | Solanales | GenEMBL BI407108.1 BQ510884.2 mRNA sequence. |
| CYP83 |
|
Solanaceae | Solanales | DN940809 |
| CYP83D1 |
|
Fabaceae | Fabales | GenEMBL AF022460 (1657bp) |
| CYP83D2X |
|
Fabaceae | Fabales | no accession number |
| CYP83D3 |
|
Fabaceae | Fabales | GenEMBL AC174315.4c |
| CYP83D4 |
|
Fabaceae | Fabales | GenEMBL AC174315.4b |
| CYP83D5 |
|
Fabaceae | Fabales | GenEMBL AC174315.4a |
| CYP83E1 |
|
Fabaceae | Fabales | no accession number |
| CYP83E2 | Fabaceae | Fabales | No accession number | |
| CYP83E3 | Fabaceae | Fabales | No accession number | |
| CYP83E4 | Fabaceae | Fabales | No accession number | |
| CYP83E5 | Fabaceae | Fabales | No accession number | |
| CYP83E6 | Fabaceae | Fabales | No accession number | |
| CYP83E7 | Fabaceae | Fabales | No accession number | |
| CYP83E8 |
|
Fabaceae | Fabales | GenEMBL DQ335787 GenPept ABC59082 |
| CYP83E9 |
|
Fabaceae | Fabales | GenEMBL DQ335788 GenPept ABC59083 |
| CYP83E10 |
|
Fabaceae | Fabales | GenEMBL AC119411.16 |
| CYP83E11 |
|
Fabaceae | Fabales | GenEMBL CT027664.2 |
| CYP83E12 |
|
Fabaceae | Fabales | DQ340234 |
| CYP83E13 |
|
Fabaceae | Fabales | No accession number |
| CYP83E14 |
|
Fabaceae | Fabales | BM892323.1 EST joins partial seqs. |
| CYP83E14 |
|
Fabaceae | Fabales | JGI Glyma0 assembly scaffold_199:57754..62313 (+ strand) |
| CYP83E15P |
|
Fabaceae | Fabales | No accession number |
| CYP83E15P |
|
Fabaceae | Fabales | JGI Glyma0 assembly scaffold_199:85275-82936 (-) strand |
| CYP83E16P |
|
Fabaceae | Fabales | JGI Glyma0 assembly scaffold_199 |
| CYP83E17 |
|
Fabaceae | Fabales | JGI Glyma0 assembly scaffold_199:104403..101806 (- strand) |
| CYP83E18 |
|
Fabaceae | Fabales | JGI Glyma0 assembly scaffold_199 |
| CYP83E19 |
|
Fabaceae | Fabales | JGI Glyma0 assembly scaffold_199:134607..132717 (- strand) |
| CYP83E20 |
|
Fabaceae | Fabales | JGI Glyma0 assembly scaffold_199:165948..164013 (- strand) |
| CYP83E21 |
|
Fabaceae | Fabales | JGI Glyma0 assembly scaffold_199:220119..218107 (- strand) |
| CYP83E22P |
|
Fabaceae | Fabales | JGI Glyma0 assembly scaffold_199:242959..244944 (+ strand) |
| CYP83F1 |
|
Salicaceae | Malpighiales | CYP83F1-se1[1] Populus trichocarpa (black cottonwood) |
| CYP82F1-se2[1] |
|
Salicaceae | Malpighiales | CYP83F2 Populus trichocarpa (black cottonwood) |
| CYP82F2-se1[1] |
|
Salicaceae | Malpighiales | CYP83F2-se2[2] Populus trichocarpa (black cottonwood) |
| CYP83F2-se3[2] |
|
Salicaceae | Malpighiales | CYP83F2-se4[1] Populus trichocarpa (black cottonwood) |
| CYP83F2-se5[1] |
|
Salicaceae | Malpighiales | CYP83F3v1 Populus trichocarpa (black cottonwood) |
| CYP83F3v1-de1b |
|
Salicaceae | Malpighiales | CYP83F3v2 Populus trichocarpa (black cottonwood) |
| CYP83F3v3 |
|
Salicaceae | Malpighiales | CYP83F3-se1[2] Populus trichocarpa (black cottonwood) |
| CYP83F3-se2[2] |
|
Salicaceae | Malpighiales | CYP83F3-se3[2] Populus trichocarpa (black cottonwood) |
| CYP83F4 |
|
Salicaceae | Malpighiales | CYP83F4-de2b Populus trichocarpa (black cottonwood) |
| CYP83F5 |
|
Salicaceae | Malpighiales | CYP83F5-de2bv1 Populus trichocarpa (black cottonwood) |
| CYP83F5-de2bv2 |
|
Salicaceae | Malpighiales | |
| CYP83G1v1 |
|
Fabaceae | Fabales | GenEMBL DQ335789, CT033764.1 GenPept ABC59084 |
| CYP83G1v2 |
|
Fabaceae | Fabales | TIGR contig TC100504 1 aa diff to CYP83G1v1, probable allele |
| CYP83G2 |
|
Fabaceae | Fabales | GenEMBL DQ394575 GenPept ABD97102 |
| CYP83G3 |
|
Fabaceae | Fabales | No accession number |
| CYP83G (frag.) | Fabaceae | Fabales | AJ487470 | |
| CYP83 |
|
Rutaceae | Sapindales | GenEMBL DN959456.1 |
| CYP83 |
|
Malvaceae | Malvales | GenMEBL CO107315.1
|
[edit] Functions
[edit] Links
- CYPedia CYP83 Functional Prediction (Cytochrome P450 Expression Database using Arabidopsis) by IBMP Strasbourg.
