P450:CYP728
From Metabolomics.JP
(Difference between revisions)
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=728 Family= | =728 Family= | ||
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&&CYP728A1&&Oryza sativa (rice)&&aaaa01016714.1 (indica cultivar-group) runs off end, one frameshift | &&CYP728A1&&Oryza sativa (rice)&&aaaa01016714.1 (indica cultivar-group) runs off end, one frameshift | ||
&&CYP728A2P&&Oryza sativa (rice)&&aaaa01041819.1 (indica cultivar-group) 96% to AAAA01016714.1 $FI | &&CYP728A2P&&Oryza sativa (rice)&&aaaa01041819.1 (indica cultivar-group) 96% to AAAA01016714.1 $FI | ||
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&&CYP728&&Amborella trichopoda&&GenEMBL CD483260 | &&CYP728&&Amborella trichopoda&&GenEMBL CD483260 | ||
&&CYP728&&Lycopersicon esculentum&&DU848112.1 DU873007.1 DU866199.1 | &&CYP728&&Lycopersicon esculentum&&DU848112.1 DU873007.1 DU866199.1 | ||
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}} | }} | ||
Latest revision as of 20:00, 21 June 2009
| P450 Top (P450トップ) |
P450 Index (P450一覧) |
Arabidopsis (シロイヌナズナ) |
Oryza (イネ) |
Species-sequence information is taken from Cytochrome P450 Homepage by Dr. Nelson. (last update 2009/06/20)
[edit] 728 Family
| ID | Species | Family | Order | Description
|
|---|---|---|---|---|
| CYP728A1 |
|
Poaceae | Poales | aaaa01016714.1 (indica cultivar-group) runs off end, one frameshift |
| CYP728A2P |
|
Poaceae | Poales | aaaa01041819.1 (indica cultivar-group) 96% to AAAA01016714.1 $FI |
| CYP728B1 |
|
Poaceae | Poales | AP003850.1i $F chromosome 7 clone OJ1793_E11 gene 7 36% to 716A2 79% to AP004051 |
| CYP728B2 |
|
Poaceae | Poales | AP004051.1 $F chromosome 7 clone OJ1218_C12 79% to AP003850 gene 7 |
| CYP728B3 |
|
Poaceae | Poales | AP005103.1b $F CYP728B3 chr 7 (3 genes on this clone) 1aa diff to aaaa01000381.1a |
| CYP728B4 |
|
Ranunculaceae | Ranunculales | DT764063, DR913945.1 |
| CYP728B5 |
|
Vitaceae | Vitales | AM457336.1 |
| CYP728B6 |
|
Vitaceae | Vitales | AM457336.1 |
| CYP728B6-de1b2b |
|
Vitaceae | Vitales | CAAP02000569.1c-de1b2b pseudogene |
| CYP728B7 |
|
Vitaceae | Vitales | AM442348.1 |
| CYP728B8 |
|
Vitaceae | Vitales | AM426541.1 |
| CYP728B9P | Caricaceae | Brassicales | supercontig_97:134503,134588 | |
| CYP728B10P | Caricaceae | Brassicales | supercontig_97:135508,144872 | |
| CYP728B11P | Caricaceae | Brassicales | supercontig_97:150659,151068 | |
| CYP728B12 | Caricaceae | Brassicales | supercontig_97:173929..176915 (+ strand) | |
| CYP728B13P | Caricaceae | Brassicales | supercontig_97:178358,178483 | |
| CYP728B14P | Caricaceae | Brassicales | supercontig_97:179454,178182 | |
| CYP728B15 |
|
Vitaceae | Vitales | CAN71701.1 |
| CYP728B16P |
|
Vitaceae | Vitales | CAAP02000569.1b (+) strand pseudogene |
| CYP728B17 |
|
Solanaceae | Solanales | FG162444.1, FG171366.1, FG139695.1 |
| CYP728B18 | Fabaceae | Fabales | CF808979.1 CX704924.1 BI970542.1 EV268719.1 | |
| CYP728 |
|
Asteraceae | Asterales | DW080285.1 42% to 728B2 rice 48% to 728B17 tobacco |
| CYP728 |
|
Cucurbitaceae | Cucurbitales | AM718389.2 57% to 728B3 rice |
| CYP728C1 |
|
Poaceae | Poales | AP003850.1h $F chromosome 7 clone OJ1793_E11 gene 6 0ne in frame stop codon |
| CYP728C2P |
|
Poaceae | Poales | AP003850.1g $P chromosome 7 clone OJ1793_E11 pseudogene 5 |
| CYP728C3 |
|
Poaceae | Poales | AP003850.1f $F chromosome 7 clone OJ1793_E11 gene 4 |
| CYP728C4 |
|
Poaceae | Poales | AP003850.1e $F chromosome 7 clone OJ1793_E11 gene 3 37% to 725A1 85% to gene 2 |
| CYP728C5 |
|
Poaceae | Poales | AP003850.1d $F chromosome 7 clone OJ1793_E11 gene 2 37% to 725A1 59% to Zea AF090447 AQ290163 40% identical to AQ050520 55% TO 716A1 |
| CYP728C6P |
|
Poaceae | Poales | AP003850.1c $P chromosome 7 clone OJ1793_E11 pseudogene fragment end of exon 2 |
| CYP728C7 |
|
Poaceae | Poales | AP003850.1b $F chromosome 7 clone OJ1793_E11 gene 1 36% to 725A1 83% to gene 2 |
| CYP728C8P |
|
Poaceae | Poales | AP003850.1a $P chromosome 7 clone OJ1793_E11 pseudogene fragment last half of ex 4 84% to gene 6 no indica ortholog found 9/6/02 |
| CYP728C9 |
|
Poaceae | Poales | AP005103.1c $F (japonica cultivar-group) chr 7 |
| CYP728C10 |
|
Poaceae | Poales | AP005103.1a $F chr 7 (3 genes on this clone) 99% |
| CYP728C11 | Poaceae | Poales | AF527807 | |
| CYP728D1P |
|
Salicaceae | Malpighiales | |
| CYP728D2 |
|
Salicaceae | Malpighiales | |
| CYP728D3P |
|
Salicaceae | Malpighiales | |
| CYP728D4 |
|
Salicaceae | Malpighiales | |
| CYP728D5 |
|
Salicaceae | Malpighiales | |
| CYP728D6P |
|
Salicaceae | Malpighiales | |
| CYP728D7v1 |
|
Salicaceae | Malpighiales | |
| CYP728D7v2 |
|
Salicaceae | Malpighiales | |
| CYP728D8 |
|
Salicaceae | Malpighiales | |
| CYP728D9P |
|
Salicaceae | Malpighiales | |
| CYP728D10P |
|
Salicaceae | Malpighiales | |
| CYP728D11P |
|
Salicaceae | Malpighiales | |
| CYP728E1 |
|
Salicaceae | Malpighiales | |
| CYP728F1 |
|
Salicaceae | Malpighiales | |
| CYP728F1-se1[3] |
|
Salicaceae | Malpighiales | |
| CYP728F1-se2[3:4]v1 |
|
Salicaceae | Malpighiales | |
| CYP728F1-se2[3:4]v2 |
|
Salicaceae | Malpighiales | |
| CYP728G1 |
|
Vitaceae | Vitales | AM454998.2, CAN70350.1 |
| CYP728G2 | Caricaceae | Brassicales | supercontig_13:1915064,1918451 | |
| CYP728 |
|
Phrymaceae | Lamiales | DV208871 |
| CYP728 |
|
Euphorbiaceae | Malpighiales | DV148052 |
| CYP728 | GenEMBL CD483260 | |||
| CYP728 | Solanaceae | Solanales | DU848112.1 DU873007.1 DU866199.1
|
[edit] Functions
[edit] Links
- CYPedia CYP728 Functional Prediction (Cytochrome P450 Expression Database using Arabidopsis) by IBMP Strasbourg.
