Template:PKSinfo
From Metabolomics.JP
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| − | + | {{#deftemp:ListRef|((#if:(((1|)))|((#substring:(((1)))|15)) ))}}{{#deftemp:SearchRef|((#repeat:ListRef|1|((#SearchLineReg:(((1)))|Category|PK/References)) ))}} | |
| + | {{#deftemp:AspGD|[http://www.aspergillusgenome.org/cgi-bin/locus.pl?locus=((PAGENAME)) AspGD]}} | ||
| + | [[Category:PK/Class]] | ||
{| class="wikitable" | {| class="wikitable" | ||
| − | + | ! colspan="4" style="text-align:center;background:gainsboro" | {{{species}}} (GenBank [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=protein&term={{{GenBank}}} {{{GenBank}}}]) <small>[[Volatile:ListField|species|PKS|all species]]</small> | |
|- | |- | ||
! Class | ! Class | ||
| − | | {{{class}}} (length: {{{length|?}}}) <small>[[Volatile:ListField|class|PKS|all classes]]</small> | + | | {{{class}}} (length: {{{length|?}}}) <small>[[Volatile:ListField|class|PKS|all classes]]</small> Class {{#nth:{{#SearchLine:{{#replace:{{PAGENAME}}| |_}}|Category|PK/Class}}|3|&&}} in [[:Category:PK/Class|KS domain phylogeny]] |
! Reliability | ! Reliability | ||
| {{{reliability|?}}} | | {{{reliability|?}}} | ||
| + | |- | ||
| + | ! Product | ||
| + | | {{{product|?}}} | ||
| + | ! GeneName | ||
| + | | {{{geneName|?}}} | ||
| + | |- | ||
| + | ! UniProt,UniRef90 | ||
| + | | [http://www.uniprot.org/uniprot/{{{UniProt|}}} {{{UniProt|}}}] , [http://www.uniprot.org/uniref/UniRef90_{{{UniRef90|}}} {{{UniRef90|}}}] | ||
| + | ! UniRef50 | ||
| + | | [http://www.uniprot.org/uniref/UniRef50_{{{UniRef50|}}} {{{UniRef50|}}}] | ||
|- | |- | ||
! Domain by [http://gate.smallsoft.co.kr:8008/~hstae/pks/mapsidb/ MAPSI] | ! Domain by [http://gate.smallsoft.co.kr:8008/~hstae/pks/mapsidb/ MAPSI] | ||
| − | |colspan="3"| {{{MAPSI}}} <small>([[Help:PKS|notation help]] / [[Volatile:ListField|MAPSI|PKS|all patterns]])</small> | + | |colspan="3"| {{PKS/DomainColor|{{{MAPSI}}}}}<small>([[Help:PKS|notation help]] / [[Volatile:ListField|MAPSI|PKS|all patterns]])</small> |
|- | |- | ||
! Domain by [http://www.ncbi.nlm.nih.gov/Structure/cdd/cdd.shtml CDD] | ! Domain by [http://www.ncbi.nlm.nih.gov/Structure/cdd/cdd.shtml CDD] | ||
| − | |colspan="3"| {{{CDD}}} <small>([[Help:PKS|notation help]] / [[Volatile:ListField|CDD|PKS|all patterns]])</small> | + | |colspan="3"| {{PKS/DomainColor|{{{CDD}}}}}<small>([[Help:PKS|notation help]] / [[Volatile:ListField|CDD|PKS|all patterns]])</small> |
| − | |- | + | |- class{{{ITERDB|}}}="hiddenStructure" |
| + | ! Domain by [http://www.nii.res.in/nrps-pks.html ITER-DB] | ||
| + | |colspan="3"| {{PKS/DomainColor|{{{ITERDB}}}}}<small>([[Help:PKS|notation help]] / [[Volatile:ListField|ITERDB|PKS|all patterns]])</small> | ||
| + | |- class{{{InferredDomain|}}}="hiddenStructure" | ||
| + | ! Estimated Domain | ||
| + | |colspan="3"| {{PKS/DomainColor|{{{InferredDomain|}}}}} | ||
| + | |-class{{{description|}}}="hiddenStructure" | ||
! Description | ! Description | ||
| − | |colspan="3"| {{{ | + | |colspan="3"| {{{description}}} |
|- | |- | ||
! Information | ! Information | ||
|colspan="3"| {{{information}}} | |colspan="3"| {{{information}}} | ||
| + | |- | ||
| + | ! References | ||
| + | |colspan="3"| {{SearchRef|{{{references|}}}}} | ||
| + | |- | ||
| + | ! Link | ||
| + | |colspan="3"| {{AspGD}} | ||
|} | |} | ||
| − | |||
Latest revision as of 11:52, 25 April 2013
| {{{species}}} (GenBank {{{GenBank}}}) all species | |||
|---|---|---|---|
| Class | {{{class}}} (length: ?) all classes Class in KS domain phylogeny | Reliability | ? |
| Product | ? | GeneName | ? |
| UniProt,UniRef90 | [1] , [2] | UniRef50 | [3] |
| Domain by MAPSI | {{{MAPSI}}} | ||
| Domain by CDD | {{{CDD}}} | ||
| Domain by ITER-DB | {{{ITERDB}}} | ||
| Estimated Domain | |||
| Description | {{{description}}} | ||
| Information | {{{information}}} | ||
| References | |||
| Link | AspGD | ||
