PKS:NFIA 093000

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Line 8: Line 8:
 
|MAPSI=KS-AT-ACP-ACP-CYC
 
|MAPSI=KS-AT-ACP-ACP-CYC
 
|CDD=KS-AT-PP-PP-TE
 
|CDD=KS-AT-PP-PP-TE
 +
|ITERDB=KS-AT-ACP-ACP-CYC
 +
|InferredDomain=SAT-KS-AT-PT-ACP-ACP-TE/CLC
 
|class=NRPKS
 
|class=NRPKS
 
|reliability=putative  
 
|reliability=putative  
 
|description=polyketide synthetase PksP [Neosartorya fischeri NRRL 181]
 
|description=polyketide synthetase PksP [Neosartorya fischeri NRRL 181]
|information=polyketide synthetase PksP-predicted by EVM?
+
|information=
 
|length=2144
 
|length=2144
|references=\*Li.+2010$
+
|references=\*Li.+2010$~\*Ahuja.+2012$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Latest revision as of 16:19, 13 May 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Neosartorya fischeri NRRL 181 (GenBank XP_001261235) all species
Class NRPKS (length: 2144) all classes   Class 14.NRPKS_I(7)Pigment-1 in KS domain phylogeny Reliability putative
Product GeneName
UniProt,UniRef90 [1] , [2] UniRef50 [3]
Domain by MAPSI KS-AT-ACP-ACP-CYC

(notation help / all patterns)

Domain by CDD KS-AT-PP-PP-TE

(notation help / all patterns)

Domain by ITER-DB KS-AT-ACP-ACP-CYC

(notation help / all patterns)

Estimated Domain SAT-KS-AT-PT-ACP-ACP-TE/CLC
Description polyketide synthetase PksP [Neosartorya fischeri NRRL 181]
Information
References
  • Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012
  • Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
Link 093000 AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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