PKS:Fung131

From Metabolomics.JP
(Difference between revisions)
Jump to: navigation, search
Line 7: Line 7:
 
|geneName=
 
|geneName=
 
|MAPSI=KS-AT-ACP-CYC
 
|MAPSI=KS-AT-ACP-CYC
|CDD=KS-AT-DH-PP-TE
+
|CDD=KS-AT-(DH)-PP-TE
 
|class=PRPKS
 
|class=PRPKS
 
|reliability=putative
 
|reliability=putative
 
|description=hypothetical protein MGG_00241 [Magnaporthe oryzae 70-15]
 
|description=hypothetical protein MGG_00241 [Magnaporthe oryzae 70-15]
|information=
+
|information=DH domain is incomplete and very short(22 aa).
 
|length=2125
 
|length=2125
 
|references=\*Li.+2010$
 
|references=\*Li.+2010$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Revision as of 17:02, 27 May 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Magnaporthe oryzae 70-15 (GenBank XP_369003) all species
Class PRPKS (length: 2125) all classes   Class 08.NRPKS_I_(1)_OAS-Like in KS domain phylogeny Reliability putative
Product GeneName
UniProt,UniRef90 [1] , [2] UniRef50 [3]
Domain by MAPSI KS-AT-ACP-CYC

(notation help / all patterns)

Domain by CDD KS-AT-(DH)-PP-TE

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description hypothetical protein MGG_00241 [Magnaporthe oryzae 70-15]
Information DH domain is incomplete and very short(22 aa).
References
  • Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

Personal tools
Namespaces

Variants
Actions
Navigation
metabolites
Toolbox