PKS:Fung081

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|product=THN  
 
|product=THN  
 
|GenBank=CAM35471
 
|GenBank=CAM35471
|geneName=
+
|geneName=PKS18
 
|MAPSI=KS-AT-ACP-ACP-CYC
 
|MAPSI=KS-AT-ACP-ACP-CYC
 
|CDD=KS-AT-PP-PP-TE
 
|CDD=KS-AT-PP-PP-TE
 +
|InferredDomain=SAT-KS-AT-PT-ACP-ACP-TE/CLC
 
|class=NRPKS
 
|class=NRPKS
|reliability=
+
|reliability=identified
 
|description=polyketide synthase [Sordaria macrospora]
 
|description=polyketide synthase [Sordaria macrospora]
 
|information=
 
|information=
 
|length=2205
 
|length=2205
 +
|references=\*Li.+2010$~\*Ahuja.+2012$~\*Engh.+2007$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Latest revision as of 22:25, 27 May 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Sordaria macrospora (GenBank CAM35471) all species
Class NRPKS (length: 2205) all classes   Class 11.NRPKS_I(4a)melanin in KS domain phylogeny Reliability identified
Product THN GeneName PKS18
UniProt,UniRef90 [1] , [2] UniRef50 [3]
Domain by MAPSI KS-AT-ACP-ACP-CYC

(notation help / all patterns)

Domain by CDD KS-AT-PP-PP-TE

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain SAT-KS-AT-PT-ACP-ACP-TE/CLC
Description polyketide synthase [Sordaria macrospora]
Information
References
  • Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012
  • Engh I, Nowrousian M, Kuck U: Regulation of melanin biosynthesis via the dihydroxynaphthalene pathway is dependent on sexual development in the ascomycete sordaria macrospora. FEMS Microbiol Lett 275(1):62-70, 2007
  • Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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