PKS:Fung020

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Line 7: Line 7:
 
|geneName=pks15
 
|geneName=pks15
 
|MAPSI=KS-AT-ACP-ACP-CYC
 
|MAPSI=KS-AT-ACP-ACP-CYC
|CDD=KS-AT-PP-(EL)
+
|CDD=KS-AT-PP-TE
 
|class=NRPKS
 
|class=NRPKS
 
|reliability=putative
 
|reliability=putative

Latest revision as of 02:40, 13 April 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Botryotinia fuckeliana (GenBank AAR90251) all species
Class NRPKS (length: 2103) all classes   Class 08.NRPKS_I_(1)_OAS-Like in KS domain phylogeny Reliability putative
Product GeneName pks15
UniProt,UniRef90 [1] , [2] UniRef50 [3]
Domain by MAPSI KS-AT-ACP-ACP-CYC

(notation help / all patterns)

Domain by CDD KS-AT-PP-TE

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description polyketide synthase [Botryotinia fuckeliana]
Information
References
  • Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
  • Valarmathi R, Hariharan GN, Venkataraman G, Parida A: Characterization of a non-reducing polyketide synthase gene from lichen dirinaria applanata. Phytochemistry 70(6):721-729, 2009
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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