PKS:Fung018

From Metabolomics.JP
(Difference between revisions)
Jump to: navigation, search
 
Line 11: Line 11:
 
|reliability=putative
 
|reliability=putative
 
|description=polyketide synthase [Botryotinia fuckeliana]
 
|description=polyketide synthase [Botryotinia fuckeliana]
|information=incompleted Sec34 before KS
+
|information=An incomplete and short Sec34 domain is in front of KS domain.
 
|length=2126
 
|length=2126
 
|references=\*Li.+2010$
 
|references=\*Li.+2010$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Latest revision as of 22:14, 27 May 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Botryotinia fuckeliana (GenBank AAR90249) all species
Class NRPKS (length: 2126) all classes   Class 11.NRPKS_I(4a)melanin in KS domain phylogeny Reliability putative
Product GeneName pks13
UniProt,UniRef90 [1] , [2] UniRef50 [3]
Domain by MAPSI KS-AT-ACP-ACP-CYC

(notation help / all patterns)

Domain by CDD (Sec34)-KS-AT-PP-PP-TE

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description polyketide synthase [Botryotinia fuckeliana]
Information An incomplete and short Sec34 domain is in front of KS domain.
References
  • Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

Personal tools
Namespaces

Variants
Actions
Navigation
metabolites
Toolbox