PKS:Fung010

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|information=Possible domain architecture: SAT-KS-AT-PT-ACP-ACP-TE/CLC
 
|information=Possible domain architecture: SAT-KS-AT-PT-ACP-ACP-TE/CLC
 
|length=2192
 
|length=2192
|references=\*Li.+2010$~\*Ahuja.+2012$
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|references=\*Li.+2010$~\*Ahuja.+2012$~\*Cheng.+2004$
 
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Revision as of 20:40, 8 May 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Exophiala lecaniicorni (GenBank AAN75188) all species
Class NRPKS (length: 2192) all classes   Class 11.NRPKS_I(4a)melanin in KS domain phylogeny Reliability
Product melanin GeneName pks1
UniProt,UniRef90 [1] , [2] UniRef50 [3]
Domain by MAPSI KS-AT-ACP-ACP-CYC

(notation help / all patterns)

Domain by CDD KS-AT-PP-PP-TE

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description polyketide synthase [Exophiala lecanii-corni]
Information Possible domain architecture: SAT-KS-AT-PT-ACP-ACP-TE/CLC
References
  • Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012
  • Cheng Q, Kinney KA, Whitman CP, Szaniszlo PJ: Characterization of two polyketide synthase genes in exophiala lecanii-corni, a melanized fungus with bioremediation potential. Bioorg Chem 32(2):92-108, 2004
  • Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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