PKS:Fung004

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|information=involved in melanin biosynthesis in Colletotrichum lagenarium.LOCUS=AF151533_1
 
|information=involved in melanin biosynthesis in Colletotrichum lagenarium.LOCUS=AF151533_1
 
|length=2159
 
|length=2159
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|references=\*Varga.+2003$~\*Li.+2010$
 
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Revision as of 14:51, 6 April 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Nodulisporium sp. ATCC74245 (GenBank AAD38786) all species
Class NRPKS (length: 2159) all classes   Class 11.NRPKS_I(4a)melanin in KS domain phylogeny Reliability putative
Product THN GeneName pks1
UniProt,UniRef90 [1] , [2] UniRef50 [3]
Domain by MAPSI KS-AT-ACP-ACP-CYC

(notation help / all patterns)

Domain by CDD KS-AT-PP-PP-TE

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description polyketide synthase [Nodulisporium sp. ATCC74245]
Information involved in melanin biosynthesis in Colletotrichum lagenarium.LOCUS=AF151533_1
References
  • Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
  • Varga J, Rigo K, Kocsube S, Farkas B, Pal K: Diversity of polyketide synthase gene sequences in Aspergillus species. Res Microbiol 154:593-600, 2003
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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