PKS:Bact64

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Line 7: Line 7:
 
|geneName=
 
|geneName=
 
|MAPSI=KS-AT-ACP-ACP
 
|MAPSI=KS-AT-ACP-ACP
|CDD=KS-AT-PP-OAT-Alkanal_monooxy-HxxPF_repF-A-PP-(TE)
+
|CDD=KS-AT-PP-OAT-Alkanal_monooxy-HxxPF_rpt-A-PP-(TE)
 
|class=NRPS-PKS
 
|class=NRPS-PKS
 
|reliability=
 
|reliability=
 
|description="aminotransferase, class III family [Stigmatella aurantiaca DW4/3-1]"
 
|description="aminotransferase, class III family [Stigmatella aurantiaca DW4/3-1]"
|information=NRPS
+
|information=NRPS-PKS
 
|length=3433
 
|length=3433
 
|references=\*Schmitt.+2009$
 
|references=\*Schmitt.+2009$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Revision as of 14:55, 27 May 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Stigmatella aurantiaca DW4/3-1 (GenBank ZP_01462080) all species
Class NRPS-PKS (length: 3433) all classes   Class 07.Bacterial_PKS_mixed_species in KS domain phylogeny Reliability
Product aminotransferase GeneName
UniProt,UniRef90 [1] , [2] UniRef50 [3]
Domain by MAPSI KS-AT-ACP-ACP

(notation help / all patterns)

Domain by CDD KS-AT-PP-OAT-Alkanal_monooxy-HxxPF_rpt-A-PP-(TE)

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description "aminotransferase, class III family [Stigmatella aurantiaca DW4/3-1]"
Information NRPS-PKS
References
  • Schmitt I, Lumbsch HT: Ancient horizontal gene transfer from bacteria enhances biosynthetic capabilities of fungi. PLoS One 4:e4437, 2009
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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