PKS:Bact50

From Metabolomics.JP
Revision as of 21:22, 16 December 2012 by Editor (Talk | contribs)

(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Myxococcus xanthus DK 1622 (GenBank YP_632575) all species
Class PKS-NRPS (length: 2742) all classes   Class 07.Bacterial_PKS_mixed_species in KS domain phylogeny Reliability putative
Product GeneName
UniProt,UniRef90 [1] , [2] UniRef50 [3]
Domain by MAPSI (notation help / all patterns)
Domain by CDD (notation help / all patterns)
Domain by ITER-DB (notation help / all patterns)
Estimated Domain
Description non-ribosomal peptide synthetase [Myxococcus xanthus DK 1622]
Information This protein looks like NRPS-PKS from domain organization. However, the annotation of YP_632575 on Genebank is NRPS.
References
  • Schmitt I, Lumbsch HT: Ancient horizontal gene transfer from bacteria enhances biosynthetic capabilities of fungi. PLoS One 4:e4437, 2009
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

Personal tools
Namespaces

Variants
Actions
Navigation
metabolites
Toolbox