PKS:Bact50
From Metabolomics.JP
(Difference between revisions)
(NRPS-PKS ->PKS-NRPS) |
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|geneName= | |geneName= | ||
|MAPSI=ACP-KS-AT-ACP-ACP | |MAPSI=ACP-KS-AT-ACP-ACP | ||
| − | |CDD=PP-KS-AT-PP- | + | |CDD=PP-KS-AT-PP-OAT_like-HxxPF_rpt-A-PP |
| − | |class=NRPS | + | |class=PKS-NRPS |
|reliability=putative | |reliability=putative | ||
|description=non-ribosomal peptide synthetase [Myxococcus xanthus DK 1622] | |description=non-ribosomal peptide synthetase [Myxococcus xanthus DK 1622] | ||
| − | |information= | + | |information=This protein looks like NRPS-PKS from domain organization. However, the annotation of YP_632575 on Genebank is NRPS. |
|length=2742 | |length=2742 | ||
| + | |references=\*Schmitt.+2009$ | ||
}} | }} | ||
{{{{NAMESPACE}}/Footer}} | {{{{NAMESPACE}}/Footer}} | ||
Latest revision as of 21:22, 16 December 2012
| Polyketide Top | Species List | UniRef90 Class | UniRef50 Class | Gene Class | Domains (by CDD) |
Domains (by MAPSI) |
| Myxococcus xanthus DK 1622 (GenBank YP_632575) all species | |||
|---|---|---|---|
| Class | PKS-NRPS (length: 2742) all classes Class 07.Bacterial_PKS_mixed_species in KS domain phylogeny | Reliability | putative |
| Product | GeneName | ||
| UniProt,UniRef90 | [1] , [2] | UniRef50 | [3] |
| Domain by MAPSI | ACP-KS-AT-ACP-ACP | ||
| Domain by CDD | PP-KS-AT-PP-OAT_like-HxxPF_rpt-A-PP | ||
| Domain by ITER-DB | {{{ITERDB}}} | ||
| Estimated Domain | |||
| Description | non-ribosomal peptide synthetase [Myxococcus xanthus DK 1622] | ||
| Information | This protein looks like NRPS-PKS from domain organization. However, the annotation of YP_632575 on Genebank is NRPS. | ||
| References |
| ||
| Link | AspGD | ||
This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)
