PKS:Afu7g00160

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(update genename and reference)
 
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|UniRef90=Q4WA61
 
|UniRef90=Q4WA61
 
|UniRef50=Q4WA61
 
|UniRef50=Q4WA61
|geneName=pks2
+
|geneName=nscA(pks2)
 
|MAPSI=KS-AT-ACP
 
|MAPSI=KS-AT-ACP
 
|CDD=KS-AT-PP
 
|CDD=KS-AT-PP
 +
|ITERDB=KS-AT-ACP
 +
|InferredDomain=SAT-KS-AT-PT-ACP
 
|class=NRPKS
 
|class=NRPKS
|reliability=putative
+
|reliability=verified
 
|description=polyketide synthase [Aspergillus fumigatus Af293]
 
|description=polyketide synthase [Aspergillus fumigatus Af293]
 
|information=
 
|information=
 
|length=1794
 
|length=1794
|references=\*Li.+2010$
+
|references=\*Li.+2010$~\*Ahuja.+2012$~\*Chooi.+2013$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Latest revision as of 15:12, 2 April 2013

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus fumigatus Af293 (GenBank XP_746913) all species
Class NRPKS (length: 1794) all classes   Class in KS domain phylogeny Reliability verified
Product GeneName nscA(pks2)
UniProt,UniRef90 Q4WA61 , Q4WA61 UniRef50 Q4WA61
Domain by MAPSI KS-AT-ACP

(notation help / all patterns)

Domain by CDD KS-AT-PP

(notation help / all patterns)

Domain by ITER-DB KS-AT-ACP

(notation help / all patterns)

Estimated Domain SAT-KS-AT-PT-ACP
Description polyketide synthase [Aspergillus fumigatus Af293]
Information
References
  • Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012
  • Chooi YH, Fang J, Liu H, Filler SG, Wang P and Tang Y: Genome mining of a prenylated and immunosuppressive polyketide from pathogenic fungi. Org Lett 15(4): 780-783. 2013
  • Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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