PKS:Afu4g00210

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|species=Aspergillus fumigatus Af293
 
|species=Aspergillus fumigatus Af293
 
|taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomyceta; Pezizomycotina; Leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Neosartorya
 
|taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomyceta; Pezizomycotina; Leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Neosartorya
|product=
+
|product=endocrocin
 
|GenBank=XP_746435
 
|GenBank=XP_746435
 
|UniProt=Q4W944
 
|UniProt=Q4W944
 
|UniRef90=Q4W944
 
|UniRef90=Q4W944
 
|UniRef50=Q4W944
 
|UniRef50=Q4W944
|geneName=pks1
+
|geneName=encA1(pks1)
 
|MAPSI=KS-AT-ACP
 
|MAPSI=KS-AT-ACP
 
|CDD=KS-AT-PP
 
|CDD=KS-AT-PP
Line 14: Line 14:
 
|InferredDomain=SAT-KS-AT-PT-ACP
 
|InferredDomain=SAT-KS-AT-PT-ACP
 
|class=NRPKS
 
|class=NRPKS
|reliability=putative
+
|reliability=verified
 
|description=polyketide synthase [Aspergillus fumigatus Af293]
 
|description=polyketide synthase [Aspergillus fumigatus Af293]
 
|information=
 
|information=
 
|length=1775
 
|length=1775
|references=\*Li.+2010$~\*Ahuja.+2012$
+
|references=\*Li.+2010$~\*Ahuja.+2012$~\*Lim.+2012$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Latest revision as of 12:30, 2 April 2013

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus fumigatus Af293 (GenBank XP_746435) all species
Class NRPKS (length: 1775) all classes   Class in KS domain phylogeny Reliability verified
Product endocrocin GeneName encA1(pks1)
UniProt,UniRef90 Q4W944 , Q4W944 UniRef50 Q4W944
Domain by MAPSI KS-AT-ACP

(notation help / all patterns)

Domain by CDD KS-AT-PP

(notation help / all patterns)

Domain by ITER-DB KS-AT-ACP

(notation help / all patterns)

Estimated Domain SAT-KS-AT-PT-ACP
Description polyketide synthase [Aspergillus fumigatus Af293]
Information
References
  • Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012
  • Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
  • Lim FY, Hou Y, Chen Y, Oh JH, Lee I, Bugni TS and Keller NP: Genome-based cluster deletion reveals an endocrocin biosynthetic pathway in Aspergillus fumigatus. Appl Environ Microbiol 78(12): 4117-4125. 2012
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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