PKS:ATEG 02434

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|reliability=putative
 
|reliability=putative
 
|description=hypothetical protein ATEG_02434 [Aspergillus terreus NIH2624]
 
|description=hypothetical protein ATEG_02434 [Aspergillus terreus NIH2624]
|information=Orthologous protein of BAB88752.
+
|information=Orthologous protein of BAB88752. Another estimated domain composition [Wang,2011]: SAT-KS-AT-PT-ACP-ACP-TE.
 
|length=1802
 
|length=1802
 
|references=\*Li.+2010$~\*Wang.+2011$~\*Ahuja.+2012$
 
|references=\*Li.+2010$~\*Wang.+2011$~\*Ahuja.+2012$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Latest revision as of 13:10, 15 May 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus terreus NIH2624 (GenBank XP_001211612) all species
Class NRPKS (length: 1802) all classes   Class 09.NRPKS_I(2) in KS domain phylogeny Reliability putative
Product GeneName pks13
UniProt,UniRef90 Q0CV50 , Q8TGD6 UniRef50 Q4W944
Domain by MAPSI KS-AT-ACP

(notation help / all patterns)

Domain by CDD KS-AT-PP

(notation help / all patterns)

Domain by ITER-DB KS-AT-ACP

(notation help / all patterns)

Estimated Domain SAT-KS-AT-PT-ACP
Description hypothetical protein ATEG_02434 [Aspergillus terreus NIH2624]
Information Orthologous protein of BAB88752. Another estimated domain composition [Wang,2011]: SAT-KS-AT-PT-ACP-ACP-TE.
References
  • Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012
  • Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
  • Wang Y, Kim JA, Cheong YH, Joshi Y, Koh YJ, Hur JS: Isolation and characterization of a reducing polyketide synthase gene from the lichen-forming fungus usnea longissima. J Microbiol 49(3):473-480, 2011
Link 02434 AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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