PKS:AO090010000114

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|geneName=
 
|geneName=
 
|MAPSI=KS-AT-ACP
 
|MAPSI=KS-AT-ACP
|CDD=KS-AT-PP-ME-KR
+
|CDD=KS-AT-PP-ME-TR
|class=PRPKS
+
|ITERDB=ACP-KS-AT-ACP
 +
|InferredDomain=SAT-KS-AT-PT-ACP-ME-R
 +
|class=NRPKS
 
|reliability=putative
 
|reliability=putative
 
|description=hypothetical protein [Aspergillus oryzae RIB40]
 
|description=hypothetical protein [Aspergillus oryzae RIB40]
|information=unnamed protein product; polyketide synthase modules and related proteins?
+
|information=This sequence has been updated ([http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=protein&term=XP_001827158.2 XP_001827158.2] ).
|length=2580
+
|length=2361
 +
|references=\*Ahuja.+2012$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Latest revision as of 19:42, 17 May 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus oryzae RIB40 (GenBank XP_001827158) all species
Class NRPKS (length: 2361) all classes   Class 21.NRPKS_III(3) in KS domain phylogeny Reliability putative
Product GeneName
UniProt,UniRef90 - , - UniRef50 -
Domain by MAPSI KS-AT-ACP

(notation help / all patterns)

Domain by CDD KS-AT-PP-ME-TR

(notation help / all patterns)

Domain by ITER-DB ACP-KS-AT-ACP

(notation help / all patterns)

Estimated Domain SAT-KS-AT-PT-ACP-ME-R
Description hypothetical protein [Aspergillus oryzae RIB40]
Information This sequence has been updated (XP_001827158.2 ).
References
  • Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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