PKS:AN9217.2

From Metabolomics.JP
(Difference between revisions)
Jump to: navigation, search
(update ITERDB inf)
Line 11: Line 11:
 
|MAPSI=KS-AT-DH-KR-ACP
 
|MAPSI=KS-AT-DH-KR-ACP
 
|CDD=Cyt-CytR-(EL)-KS-AT-DH-ER-KR-PP
 
|CDD=Cyt-CytR-(EL)-KS-AT-DH-ER-KR-PP
 +
|Iterdb=KS-AT-DH-ER-KR-ACP
 
|class=RPKS
 
|class=RPKS
 
|reliability=putative
 
|reliability=putative

Revision as of 15:40, 29 May 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus nidulans FGSC A4 (GenBank EAA61508) all species
Class RPKS (length: 3165) all classes   Class 43.R-PKS_X in KS domain phylogeny Reliability putative
Product GeneName
UniProt,UniRef90 Q5AR63 , Q5AR63 UniRef50 C5FNM3
Domain by MAPSI KS-AT-DH-KR-ACP

(notation help / all patterns)

Domain by CDD Cyt-CytR-(EL)-KS-AT-DH-ER-KR-PP

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description hypothetical protein AN9217.2 [Aspergillus nidulans FGSC A4]
Information TE is EL domain.
References
  • Castoe TA, Stephens T, Noonan BP, Calestani C: A novel group of type I polyketide synthases (PKS) in animals and the complex phylogenomics of PKSs. Gene 392:47-58, 2007
  • Schmitt I, Lumbsch HT: Ancient horizontal gene transfer from bacteria enhances biosynthetic capabilities of fungi. PLoS One 4:e4437, 2009
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

Personal tools
Namespaces

Variants
Actions
Navigation
metabolites
Toolbox