PKS:AN8910

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(update information (gene cluster) and reference)
 
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|taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomyceta; Pezizomycotina; Leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Emericella
 
|taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomyceta; Pezizomycotina; Leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Emericella
 
|product=
 
|product=
|GenBank=CBF84683
+
|GenBank=CBF84476
|UniProt=C8VLK6
+
|UniProt=C8VKZ6
|UniRef90=C8VLK6
+
|UniRef90=C8VKZ6
|UniRef50=C8VLK6
+
|UniRef50=C8VKZ6
 
|geneName=
 
|geneName=
 
|MAPSI=KS-AT-DH-ER-KR-ACP
 
|MAPSI=KS-AT-DH-ER-KR-ACP
|CDD=KS-AT-DH-(ME)-ER-KR-PP
+
|CDD=KS-AT-DH-ME-ER-KR
|class=RPKS
+
|class=PRPKS
 
|reliability=putative  
 
|reliability=putative  
 
|description=TPA: polyketide synthase-putative (JCVI) [Aspergillus nidulans FGSC A4]
 
|description=TPA: polyketide synthase-putative (JCVI) [Aspergillus nidulans FGSC A4]
|information=polyketide synthase-putative (JCVI); Comment: similar to Fum5p; polyketide synthase (GI:5453383) {Gibberella moniliformis} PMID:10413619 ?
+
|information=incompleted AT. Predicted cluster size: 1 genes.
|length=2449
+
|length=2404
 +
|references=\*Andersen.+2013$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Latest revision as of 17:51, 27 March 2013

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus nidulans FGSC A4 (GenBank CBF84476) all species
Class PRPKS (length: 2404) all classes   Class in KS domain phylogeny Reliability putative
Product GeneName
UniProt,UniRef90 C8VKZ6 , C8VKZ6 UniRef50 C8VKZ6
Domain by MAPSI KS-AT-DH-ER-KR-ACP

(notation help / all patterns)

Domain by CDD KS-AT-DH-ME-ER-KR

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description TPA: polyketide synthase-putative (JCVI) [Aspergillus nidulans FGSC A4]
Information incompleted AT. Predicted cluster size: 1 genes.
References
  • Andersen M R, Nielsen J B, Klitgaard A, Petersen L M, Zachariasen M, Hansen T J, Blicher L H, Gotfredsen C H, Larsen T O, Nielsen K F, Mortensen U H: Accurate prediction of secondary metabolite gene clusters in filamentous fungi. Proc Natl Acad Sci U S A 110(1): E99-107. 2013
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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