PKS:AN7903

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|information=Only partial fragment(GeneBank accession ID=XP_681172.1). No corresponding GeneBank ID for the full length is found yet. Predicted cluster size: 12 genes.
 
|information=Only partial fragment(GeneBank accession ID=XP_681172.1). No corresponding GeneBank ID for the full length is found yet. Predicted cluster size: 12 genes.
 
|length=2605
 
|length=2605
|references=\*Ahuja.+2012$\*Andersen.+2013$
+
|references=\*Ahuja.+2012$~\*Andersen.+2013$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Latest revision as of 18:18, 23 March 2013

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus nidulans FGSC A4 (GenBank XP_681172.1) all species
Class NRPKS (length: 2605) all classes   Class in KS domain phylogeny Reliability
Product Violaceol I and II GeneName pkeA
UniProt,UniRef90 [1] , [2] UniRef50 [3]
Domain by MAPSI KS-AT-ACP

(notation help / all patterns)

Domain by CDD KS-AT-PP-ME-TE

(notation help / all patterns)

Domain by ITER-DB KS-AT-ACP

(notation help / all patterns)

Estimated Domain SAT-KS-AT-PT-ACP-ME-R
Description hypothetical protein AN1034.2 [Aspergillus nidulans FGSC A4]
Information Only partial fragment(GeneBank accession ID=XP_681172.1). No corresponding GeneBank ID for the full length is found yet. Predicted cluster size: 12 genes.
References
  • Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012
  • Andersen M R, Nielsen J B, Klitgaard A, Petersen L M, Zachariasen M, Hansen T J, Blicher L H, Gotfredsen C H, Larsen T O, Nielsen K F, Mortensen U H: Accurate prediction of secondary metabolite gene clusters in filamentous fungi. Proc Natl Acad Sci U S A 110(1): E99-107. 2013
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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