PKS:AN7815

From Metabolomics.JP
(Difference between revisions)
Jump to: navigation, search
(new entry:AN7815)
 
(reliability=Verified)
 
Line 12: Line 12:
 
|CDD=KS-ACP-ACP
 
|CDD=KS-ACP-ACP
 
|class=NRPKS
 
|class=NRPKS
|reliability=putative
+
|reliability=Verified
 
|description=
 
|description=
 
|information=EAA61603.1, no AT domain
 
|information=EAA61603.1, no AT domain

Latest revision as of 17:32, 26 March 2013

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus nidulans FGSC A4 (GenBank XP_681084.1) all species
Class NRPKS (length: 1559) all classes   Class in KS domain phylogeny Reliability Verified
Product sterigmatocystin GeneName stcJ
UniProt,UniRef90 [1] , [2] UniRef50 [3]
Domain by MAPSI x

(notation help / all patterns)

Domain by CDD KS-ACP-ACP

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description
Information EAA61603.1, no AT domain
References
  • Andersen M R, Nielsen J B, Klitgaard A, Petersen L M, Zachariasen M, Hansen T J, Blicher L H, Gotfredsen C H, Larsen T O, Nielsen K F, Mortensen U H: Accurate prediction of secondary metabolite gene clusters in filamentous fungi. Proc Natl Acad Sci U S A 110(1): E99-107. 2013
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

Personal tools
Namespaces

Variants
Actions
Navigation
metabolites
Toolbox