PKS:AN7084

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m (Editor moved page PKS:ANIA 07084 to PKS:AN7084: consistent with the ID of ASPGD)
(update references, update information: gene cluster)
 
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|reliability=
 
|reliability=
 
|description=hypothetical protein AN7084.2 [Aspergillus nidulans FGSC A4]
 
|description=hypothetical protein AN7084.2 [Aspergillus nidulans FGSC A4]
|information=incompleted AT
+
|information=incompleted AT. Predicted cluster size: 8 genes.
 
|length=2388
 
|length=2388
 +
|references=\*Ahuja.+2012$~\*Andersen.+2013$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Latest revision as of 16:31, 26 March 2013

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus nidulans FGSC A4 (GenBank XP_664688) all species
Class RPKS (length: 2388) all classes   Class in KS domain phylogeny Reliability
Product GeneName
UniProt,UniRef90 C8VDF2 , C8VDF2 UniRef50 C8VDF2
Domain by MAPSI KS-AT-DH-ER-KR-ACP

(notation help / all patterns)

Domain by CDD KS-(AT)-DH-ER-KR-(PP)

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description hypothetical protein AN7084.2 [Aspergillus nidulans FGSC A4]
Information incompleted AT. Predicted cluster size: 8 genes.
References
  • Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012
  • Andersen M R, Nielsen J B, Klitgaard A, Petersen L M, Zachariasen M, Hansen T J, Blicher L H, Gotfredsen C H, Larsen T O, Nielsen K F, Mortensen U H: Accurate prediction of secondary metabolite gene clusters in filamentous fungi. Proc Natl Acad Sci U S A 110(1): E99-107. 2013
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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