PKS:AN6448

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m (Editor moved page PKS:ANIA 06448 to PKS:AN6448: consistent with the ID of ASPGD)
(add ref: Andersen 2013, Predicted cluster size)
 
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|reliability=identified
 
|reliability=identified
 
|description=hypothetical protein AN6448.2 [Aspergillus nidulans FGSC A4]
 
|description=hypothetical protein AN6448.2 [Aspergillus nidulans FGSC A4]
|information=
+
|information=Predicted cluster size: 8 genes.
 
|length=2517
 
|length=2517
|references=\*Ahuja.+2012$
+
|references=\*Ahuja.+2012$~\*Andersen.+2013$
 
}}
 
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Latest revision as of 14:08, 26 March 2013

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus nidulans FGSC A4 (GenBank XP_664052) all species
Class NRPKS (length: 2517) all classes   Class in KS domain phylogeny Reliability identified
Product 3-Methylorsellinic acid, 2,5-dimethylresorcinol GeneName pks16(pkbA)
UniProt,UniRef90 C8V0D5 , C8V0D5 UniRef50 C8V0D5
Domain by MAPSI KS-AT-ACP-ACP

(notation help / all patterns)

Domain by CDD KS-AT-PP-PP-ME-TE

(notation help / all patterns)

Domain by ITER-DB KS-AT-ACP-ACP

(notation help / all patterns)

Estimated Domain SAT-KS-AT-PT-ACP-ACP-ME-TE
Description hypothetical protein AN6448.2 [Aspergillus nidulans FGSC A4]
Information Predicted cluster size: 8 genes.
References
  • Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012
  • Andersen M R, Nielsen J B, Klitgaard A, Petersen L M, Zachariasen M, Hansen T J, Blicher L H, Gotfredsen C H, Larsen T O, Nielsen K F, Mortensen U H: Accurate prediction of secondary metabolite gene clusters in filamentous fungi. Proc Natl Acad Sci U S A 110(1): E99-107. 2013
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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