PKS:AN6000

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m (PKS:ANid24 moved to PKS:ANid24*)
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|product=asperthecin  
 
|product=asperthecin  
 
|GenBank=XP_663604
 
|GenBank=XP_663604
 +
|UniProt=C8V346
 +
|UniRef90=C8V346
 +
|UniRef50=D7PHZ2
 
|geneName=aptA  
 
|geneName=aptA  
 
|MAPSI=KS-AT-ACP
 
|MAPSI=KS-AT-ACP
|CDD=KS-AT-(PHA03272)-PP
+
|CDD=KS-AT-PP
 +
|ITERDB=KS-AT-ACP
 +
|InferredDomain=SAT-KS-AT-PT-ACP
 
|class=NRPKS
 
|class=NRPKS
 
|reliability=
 
|reliability=
 
|description=hypothetical protein AN6000.2 [Aspergillus nidulans FGSC A4]
 
|description=hypothetical protein AN6000.2 [Aspergillus nidulans FGSC A4]
|information=
+
|information=Predicted cluster size: 3 genes.
 
|length=1792
 
|length=1792
 +
|references=\*Li.+2010$~\*Ahuja.+2012$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Latest revision as of 15:14, 26 March 2013

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus nidulans FGSC A4 (GenBank XP_663604) all species
Class NRPKS (length: 1792) all classes   Class in KS domain phylogeny Reliability
Product asperthecin GeneName aptA
UniProt,UniRef90 C8V346 , C8V346 UniRef50 D7PHZ2
Domain by MAPSI KS-AT-ACP

(notation help / all patterns)

Domain by CDD KS-AT-PP

(notation help / all patterns)

Domain by ITER-DB KS-AT-ACP

(notation help / all patterns)

Estimated Domain SAT-KS-AT-PT-ACP
Description hypothetical protein AN6000.2 [Aspergillus nidulans FGSC A4]
Information Predicted cluster size: 3 genes.
References
  • Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012
  • Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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