PKS:AN2035

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m (Editor moved page PKS:ANIA 02035 to PKS:AN2035: consistent with the ID of ASPGD)
(update information (gene cluster) and reference)
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|species=Aspergillus nidulans FGSC A4
 
|species=Aspergillus nidulans FGSC A4
 
|taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomyceta; Pezizomycotina; Leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Emericella
 
|taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomyceta; Pezizomycotina; Leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Emericella
|product=
+
|product=osellinaldehyde; 3-(2,4-dihydroxy-6-methylbenzyl)-orsellinaldehyde
|GenBank=XP_659639
+
|GenBank=XP_659636
|UniProt=C8VLG3
+
|UniProt=C8VLG0
|UniRef90=C8VLG3
+
|UniRef90=C8VLG0
|UniRef50=Q4WF41
+
|UniRef50=C8VLG0
|geneName=
+
|geneName=pks17(pkhA)
|MAPSI=KS-AT-DH-ER-KR-ACP
+
|MAPSI=KS-AT-ACP
|CDD=KS-AT-DH-ME-ER-KR-PP
+
|CDD=KS-AT-PP-TE
|class=RPKS
+
|ITERDB=ACP-KS-AT-ACP
|reliability=
+
|InferredDomain=SAT-KS-AT-PT-ACP-ME-R
|description=hypothetical protein AN2035.2 [Aspergillus nidulans FGSC A4]
+
|class=NRPKS
|information=
+
|reliability=Verified
|length=2544
+
|description=hypothetical protein AN2032.2 [Aspergillus nidulans FGSC A4]
 +
|information=Predicted cluster size: 10 genes.
 +
|references=\*Ahuja.+2012$~\*Andersen.+2013$
 +
|length=2221
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Revision as of 12:26, 28 March 2013

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus nidulans FGSC A4 (GenBank XP_659636) all species
Class NRPKS (length: 2221) all classes   Class in KS domain phylogeny Reliability Verified
Product osellinaldehyde; 3-(2,4-dihydroxy-6-methylbenzyl)-orsellinaldehyde GeneName pks17(pkhA)
UniProt,UniRef90 C8VLG0 , C8VLG0 UniRef50 C8VLG0
Domain by MAPSI (notation help / all patterns)
Domain by CDD (notation help / all patterns)
Domain by ITER-DB (notation help / all patterns)
Estimated Domain
Description hypothetical protein AN2032.2 [Aspergillus nidulans FGSC A4]
Information Predicted cluster size: 10 genes.
References
  • Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012
  • Andersen M R, Nielsen J B, Klitgaard A, Petersen L M, Zachariasen M, Hansen T J, Blicher L H, Gotfredsen C H, Larsen T O, Nielsen K F, Mortensen U H: Accurate prediction of secondary metabolite gene clusters in filamentous fungi. Proc Natl Acad Sci U S A 110(1): E99-107. 2013
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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