PKS:AN2035

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(update information (gene cluster) and reference)
 
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|UniRef90=C8VLG3
 
|UniRef90=C8VLG3
 
|UniRef50=Q4WF41
 
|UniRef50=Q4WF41
|geneName=
+
|geneName=pkhB
 
|MAPSI=KS-AT-DH-ER-KR-ACP
 
|MAPSI=KS-AT-DH-ER-KR-ACP
 
|CDD=KS-AT-DH-ME-ER-KR-PP
 
|CDD=KS-AT-DH-ME-ER-KR-PP
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|reliability=
 
|reliability=
 
|description=hypothetical protein AN2035.2 [Aspergillus nidulans FGSC A4]
 
|description=hypothetical protein AN2035.2 [Aspergillus nidulans FGSC A4]
|information=
+
|information=Predicted cluster size: 10 genes.
 
|length=2544
 
|length=2544
 +
|references=\*Andersen.+2013$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Latest revision as of 12:28, 28 March 2013

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus nidulans FGSC A4 (GenBank XP_659639) all species
Class RPKS (length: 2544) all classes   Class in KS domain phylogeny Reliability
Product GeneName pkhB
UniProt,UniRef90 C8VLG3 , C8VLG3 UniRef50 Q4WF41
Domain by MAPSI KS-AT-DH-ER-KR-ACP

(notation help / all patterns)

Domain by CDD KS-AT-DH-ME-ER-KR-PP

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description hypothetical protein AN2035.2 [Aspergillus nidulans FGSC A4]
Information Predicted cluster size: 10 genes.
References
  • Andersen M R, Nielsen J B, Klitgaard A, Petersen L M, Zachariasen M, Hansen T J, Blicher L H, Gotfredsen C H, Larsen T O, Nielsen K F, Mortensen U H: Accurate prediction of secondary metabolite gene clusters in filamentous fungi. Proc Natl Acad Sci U S A 110(1): E99-107. 2013
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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