PKS:AN1036

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m (Editor moved page PKS:ANIA 01036 to PKS:AN1036: consistent with the ID of ASPGD)
(update information (gene cluster) and reference)
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|UniRef90=C8VTX6
 
|UniRef90=C8VTX6
 
|UniRef50=C8VTX6
 
|UniRef50=C8VTX6
|geneName=
+
|geneName=afoG
 
|MAPSI=KS-AT-DH-ER-KR-ACP
 
|MAPSI=KS-AT-DH-ER-KR-ACP
 
|CDD=KS-AT-DH-ME-ER-KR-PP
 
|CDD=KS-AT-DH-ME-ER-KR-PP
 
|class=RPKS
 
|class=RPKS
|reliability=putative
+
|reliability=Verified
 
|description=hypothetical protein AN1036.2 [Aspergillus nidulans FGSC A4]
 
|description=hypothetical protein AN1036.2 [Aspergillus nidulans FGSC A4]
 
|information=
 
|information=
 
|length=2527
 
|length=2527
|references=\*Castoe.+2007$~\*Fisch.+2009$
+
|references=\*Castoe.+2007$~\*Fisch.+2009$~\*Andersen.+2013$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Revision as of 12:57, 28 March 2013

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus nidulans FGSC A4 (GenBank XP_658640) all species
Class RPKS (length: 2527) all classes   Class in KS domain phylogeny Reliability Verified
Product GeneName afoG
UniProt,UniRef90 C8VTX6 , C8VTX6 UniRef50 C8VTX6
Domain by MAPSI KS-AT-DH-ER-KR-ACP

(notation help / all patterns)

Domain by CDD KS-AT-DH-ME-ER-KR-PP

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description hypothetical protein AN1036.2 [Aspergillus nidulans FGSC A4]
Information
References
  • Andersen M R, Nielsen J B, Klitgaard A, Petersen L M, Zachariasen M, Hansen T J, Blicher L H, Gotfredsen C H, Larsen T O, Nielsen K F, Mortensen U H: Accurate prediction of secondary metabolite gene clusters in filamentous fungi. Proc Natl Acad Sci U S A 110(1): E99-107. 2013
  • Castoe TA, Stephens T, Noonan BP, Calestani C: A novel group of type I polyketide synthases (PKS) in animals and the complex phylogenomics of PKSs. Gene 392:47-58, 2007
  • Fisch KM, Gillaspy AF, Gipson M, Henrikson JC, Hoover AR, Jackson L, Najar FZ, Wagele H, Cichewicz RH: Chemical induction of silent biosynthetic pathway transcription in aspergillus niger. J Ind Microbiol Biotechnol 36(9):1199-1213, 2009
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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