PKS:AN0523

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|UniRef90=C8VSV1
 
|UniRef90=C8VSV1
 
|UniRef50=B8NMU6
 
|UniRef50=B8NMU6
|geneName=pks14
+
|geneName=pks14(pkdA)
 
|MAPSI=KS-AT-ACP
 
|MAPSI=KS-AT-ACP
|CDD=KS-AT-PP-KR
+
|CDD=KS-AT-PP-TE
 
|ITERDB=KS-AT-ACP
 
|ITERDB=KS-AT-ACP
 
|InferredDomain=SAT-KS-AT-PT-ACP-ME-R
 
|InferredDomain=SAT-KS-AT-PT-ACP-ME-R
 
|class=NRPKS
 
|class=NRPKS
|reliability=
+
|reliability=verified
 
|description=hypothetical protein AN0523.2 [Aspergillus nidulans FGSC A4]
 
|description=hypothetical protein AN0523.2 [Aspergillus nidulans FGSC A4]
 
|information=
 
|information=
 
|length=2476
 
|length=2476
 +
|references=\*Ahuja.+2012$~\*Andersen.+2013$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Latest revision as of 13:04, 28 March 2013

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus nidulans FGSC A4 (GenBank XP_658127) all species
Class NRPKS (length: 2476) all classes   Class in KS domain phylogeny Reliability verified
Product GeneName pks14(pkdA)
UniProt,UniRef90 C8VSV1 , C8VSV1 UniRef50 B8NMU6
Domain by MAPSI KS-AT-ACP

(notation help / all patterns)

Domain by CDD KS-AT-PP-TE

(notation help / all patterns)

Domain by ITER-DB KS-AT-ACP

(notation help / all patterns)

Estimated Domain SAT-KS-AT-PT-ACP-ME-R
Description hypothetical protein AN0523.2 [Aspergillus nidulans FGSC A4]
Information
References
  • Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012
  • Andersen M R, Nielsen J B, Klitgaard A, Petersen L M, Zachariasen M, Hansen T J, Blicher L H, Gotfredsen C H, Larsen T O, Nielsen K F, Mortensen U H: Accurate prediction of secondary metabolite gene clusters in filamentous fungi. Proc Natl Acad Sci U S A 110(1): E99-107. 2013
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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