Category:BMAA
From Metabolomics.JP
(Difference between revisions)
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|[[:Category:BMAAS6|BMAAS6]] | |[[:Category:BMAAS6|BMAAS6]] | ||
|style="text-align:center"|[[:Category:BMAAS6|Straight length 6]]<br>Lys<br>[[Image:BMAAS6.png|90px]] | |style="text-align:center"|[[:Category:BMAAS6|Straight length 6]]<br>Lys<br>[[Image:BMAAS6.png|90px]] | ||
| + | | || | ||
|- | |- | ||
! colspan="6"| Branched Class | ! colspan="6"| Branched Class | ||
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|style="text-align:center"|[[:Category:BMAAB6|Branched length 6]]<br>[[Image:BMAAB6.png|90px]] | |style="text-align:center"|[[:Category:BMAAB6|Branched length 6]]<br>[[Image:BMAAB6.png|90px]] | ||
|- | |- | ||
| − | <!---- | + | |[[:Category:BMAACC|BMAACC]] |
| + | |colspan="2" style="text-align:center"|[[:Category:BMAACC|Cyclic]] <br>Phe, Tyr, Trp, His, Pro<br>[[Image:BMAACC.png|120px]] | ||
| + | | || || | ||
| + | |} <!---- | ||
|[[:Category:BMAAB7|BMAAB7]] | |[[:Category:BMAAB7|BMAAB7]] | ||
|style="text-align:center"|[[:Category:BMAAB7|Branched length 7]]<br>[[Image:BMAAB7.png|90px]] | |style="text-align:center"|[[:Category:BMAAB7|Branched length 7]]<br>[[Image:BMAAB7.png|90px]] | ||
|[[:Category:BMAAB8|BMAAB8]] | |[[:Category:BMAAB8|BMAAB8]] | ||
| − | |style="text-align:center"|[[:Category:BMAAB8|Branched length 8]]<br>[[Image:BMAAB8.png|90px]] | + | |style="text-align:center"|[[:Category:BMAAB8|Branched length 8]]<br>[[Image:BMAAB8.png|90px]] ----> |
| − | ----> | + | |
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
{| class="collapsible" border="1" cellspacing="0" | {| class="collapsible" border="1" cellspacing="0" | ||
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|- | |- | ||
|- | |- | ||
| − | | alanine || Ala || A || -CH3 || | + | | alanine || Ala || A || -CH3 || neutral || 6.0 || |
|- | |- | ||
| − | | serine || Ser || S || -CH2OH || | + | | serine || Ser || S || -CH2OH || neutral || 5.7 || |
|- | |- | ||
| − | | threonine || Thr || T || -CH(OH)CH3 || | + | | threonine || Thr || T || -CH(OH)CH3 || neutral || 5.6 || ○ |
|- | |- | ||
| − | | valine || Val || V || -CH(CH3)2 || | + | | valine || Val || V || -CH(CH3)2 || neutral, branched || 6.0 || ○ |
|- | |- | ||
| − | | leucine || Leu || L || -CH2CH(CH3)2 || | + | | leucine || Leu || L || -CH2CH(CH3)2 || neutral, branched || 6.0 || ○ |
|- | |- | ||
| − | | isoleucine || Ile || I || -CH(CH3)CH2CH3 || | + | | isoleucine || Ile || I || -CH(CH3)CH2CH3 || neutral, branched || 6.0 || ○ |
|- | |- | ||
| − | | aspartic acid || Asp || D || -CH2COOH || | + | | aspartic acid || Asp || D || -CH2COOH || acidic || 2.8 || |
|- | |- | ||
| − | | glutamic acid || Glu || E || -CH2CH2COOH || | + | | glutamic acid || Glu || E || -CH2CH2COOH || acidic || 3.2 || |
|- | |- | ||
| − | | asparagine || Asn || N || -CH2CONH2 || | + | | asparagine || Asn || N || -CH2CONH2 || acidic, amido || 5.4 || |
|- | |- | ||
| − | | glutamine || Gln || Q || -CH2CH2CONH2 || | + | | glutamine || Gln || Q || -CH2CH2CONH2 || acidic, amido || 5.7 || |
|- | |- | ||
| − | | lysine || Lys || K || -(CH2)4NH2 || | + | | lysine || Lys || K || -(CH2)4NH2 || basic || 9.7 || ○ |
|- | |- | ||
| − | | arginine || Arg || R || -(CH2)3NHC(=NH)NH2 || | + | | arginine || Arg || R || -(CH2)3NHC(=NH)NH2 || basic || 10.8 || |
|- | |- | ||
| − | | cysteine || Cys || C || -CH2SH || | + | | cysteine || Cys || C || -CH2SH || neutral, S || 5.1 || |
|- | |- | ||
| − | | methionine || Met || M || -(CH2)2SCH3 || | + | | methionine || Met || M || -(CH2)2SCH3 || neutral, S || 5.7 || ○ |
|- | |- | ||
| − | | phenylalanine || Phe || F || -CH2-Benz || | + | | phenylalanine || Phe || F || -CH2-Benz || neutral, aromatic || 5.5 || ○ |
|- | |- | ||
| − | | tyrosine || Tyr || Y || -CH2-Benz-OH || | + | | tyrosine || Tyr || Y || -CH2-Benz-OH || neutral, aromatic || 5.7 || |
|- | |- | ||
| − | | tryptophan || Trp || W || -CH2-Indole || | + | | tryptophan || Trp || W || -CH2-Indole || neutral, aromatic || 5.9 || ○ |
|- | |- | ||
| − | | histidine || His || H || -CH2-Imidazole || | + | | histidine || His || H || -CH2-Imidazole || basic, atomatic || 7.6 || ○ |
|- | |- | ||
| − | | proline || Pro || P || -NH-(CH2)3- || | + | | proline || Pro || P || -NH-(CH2)3- || neutral, cyclic, 2nd amine || 6.2 || |
|} | |} | ||
Revision as of 10:48, 21 May 2008
| Basic Metabolism Top (代謝トップ) |
Molecule Index (化合物索引) |
EC classes ( EC分類) |
Input New Data (新規入力) |
Upper classes : BM Basic Metabolites
BMAA: Amino Acids
<p> Proteins are constituted from 20 amino acids. An amino acid has a carbon connected by an amino group and a carboxyl group (called an alpha carbon).
</p>| Straight Class | |||||
|---|---|---|---|---|---|
| BMAAS2 | Straight length 2 Gly 
|
BMAAS3 | Straight length 3 Ser, Cys, Ala 
|
BMAAS4 | Straight length 4 Asp, Asn, Thr 
|
| BMAAS5 | Straight length 5 Gln, Glu 
|
BMAAS6 | Straight length 6 Lys 
|
||
| Branched Class | |||||
| BMAAB4 | Branched length 4 Val, Met 
|
BMAAB5 | Branched length 5 Arg, Leu, Ile 
|
BMAAB6 | Branched length 6
|
| BMAACC | Cyclic Phe, Tyr, Trp, His, Pro 120px |
||||
| Name | Code | Symbol | Structure | Character | pI | Required? |
|---|---|---|---|---|---|---|
| alanine | Ala | A | -CH3 | neutral | 6.0 | |
| serine | Ser | S | -CH2OH | neutral | 5.7 | |
| threonine | Thr | T | -CH(OH)CH3 | neutral | 5.6 | ○ |
| valine | Val | V | -CH(CH3)2 | neutral, branched | 6.0 | ○ |
| leucine | Leu | L | -CH2CH(CH3)2 | neutral, branched | 6.0 | ○ |
| isoleucine | Ile | I | -CH(CH3)CH2CH3 | neutral, branched | 6.0 | ○ |
| aspartic acid | Asp | D | -CH2COOH | acidic | 2.8 | |
| glutamic acid | Glu | E | -CH2CH2COOH | acidic | 3.2 | |
| asparagine | Asn | N | -CH2CONH2 | acidic, amido | 5.4 | |
| glutamine | Gln | Q | -CH2CH2CONH2 | acidic, amido | 5.7 | |
| lysine | Lys | K | -(CH2)4NH2 | basic | 9.7 | ○ |
| arginine | Arg | R | -(CH2)3NHC(=NH)NH2 | basic | 10.8 | |
| cysteine | Cys | C | -CH2SH | neutral, S | 5.1 | |
| methionine | Met | M | -(CH2)2SCH3 | neutral, S | 5.7 | ○ |
| phenylalanine | Phe | F | -CH2-Benz | neutral, aromatic | 5.5 | ○ |
| tyrosine | Tyr | Y | -CH2-Benz-OH | neutral, aromatic | 5.7 | |
| tryptophan | Trp | W | -CH2-Indole | neutral, aromatic | 5.9 | ○ |
| histidine | His | H | -CH2-Imidazole | basic, atomatic | 7.6 | ○ |
| proline | Pro | P | -NH-(CH2)3- | neutral, cyclic, 2nd amine | 6.2 |
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