BM All
From Metabolomics.JP
(Difference between revisions)
| Line 4: | Line 4: | ||
{{ClassifiedTable|1= | {{ClassifiedTable|1= | ||
&& BM && basic metabolites (including organic acids, ketones, alcohols, hydrocarbons, and DNA bases) && | && BM && basic metabolites (including organic acids, ketones, alcohols, hydrocarbons, and DNA bases) && | ||
| − | && BMIO && inorganics && | + | && '''BMIO''' && '''inorganics''' && |
&& BMIOOX && oxidized elements && | && BMIOOX && oxidized elements && | ||
&& BMIOMT && metals and halogens (and other atomic elements) && | && BMIOMT && metals and halogens (and other atomic elements) && | ||
| Line 10: | Line 10: | ||
&& BMIOPP && phosphates && | && BMIOPP && phosphates && | ||
&& BMIOSF && sulfates && | && BMIOSF && sulfates && | ||
| − | && BMAA && amino acids | + | && '''BMAA''' && '''amino acids''' && |
&& BMAAST && straight-chain amino acids && | && BMAAST && straight-chain amino acids && | ||
&& BMAABT && branched-chain amino acids && | && BMAABT && branched-chain amino acids && | ||
&& BMAACA && cyclic and aromatic amino acids && | && BMAACA && cyclic and aromatic amino acids && | ||
&& BMAD && amino acid derivatives including peptides && | && BMAD && amino acid derivatives including peptides && | ||
| − | && '''BMSC''' && straight-chain molecules && 186 | + | && '''BMSC''' && '''straight-chain molecules''' && 186 |
&& BMSC02 && with one carbon && 16 | && BMSC02 && with one carbon && 16 | ||
&& BMSC02 && with carbon chain length 2 && 18 | && BMSC02 && with carbon chain length 2 && 18 | ||
| Line 21: | Line 21: | ||
&& BMSC04 && with carbon chain length 4 && 35 | && BMSC04 && with carbon chain length 4 && 35 | ||
&& BMSC05 && with carbon chain length 5 && 25 | && BMSC05 && with carbon chain length 5 && 25 | ||
| − | && BMSC06 && with carbon chain length 6 && | + | && BMSC06 && with carbon chain length 6 && 22 |
&& BMSC07 && with carbon chain length 7 && 17 | && BMSC07 && with carbon chain length 7 && 17 | ||
&& BMSC08 && with carbon chain length over 8 && 6 | && BMSC08 && with carbon chain length over 8 && 6 | ||
| − | && '''BMBC''' && branched-chain molecules && 124 | + | && '''BMBC''' && '''branched-chain molecules''' && 124 |
| − | && BMBCXX && with one branch && | + | && BMBCXX && with one branch && 45 |
&& BMBCYY && ester, ether, amido, thioether, phosphate etc. && 50 | && BMBCYY && ester, ether, amido, thioether, phosphate etc. && 50 | ||
| − | && BMBCZZ && with two or more branches && | + | && BMBCZZ && with two or more branches && 31 |
| − | && '''BMMC''' && mono-cyclic or cyclic assembled molecules && 627 | + | && '''BMMC''' && '''mono-cyclic or cyclic assembled molecules''' && 627 |
&& BMMCBZ && with benzene ring && 229 | && BMMCBZ && with benzene ring && 229 | ||
| − | && BMMCBZ && with benzene ring (Substitution = 0,1,2o,2m,2p,3,4,5,6) && 1, | + | && BMMCBZ && with benzene ring (Substitution = 0,1,2o,2m,2p,3,4,5,6) && 1,44,(33,11,57),55,11,1,1 |
&& BMMCPD && with pyridine ring (nicotinate, pyridoxal, ...) && 38 | && BMMCPD && with pyridine ring (nicotinate, pyridoxal, ...) && 38 | ||
&& BMMCPY && with pyrimidine ring (CXP, TXP, orotate ...) && 120 | && BMMCPY && with pyrimidine ring (CXP, TXP, orotate ...) && 120 | ||
| − | && BMMCPYCT && with Cytosine && | + | && BMMCPYCT && with Cytosine && 26 |
| − | && BMMCPYTY && with Thymine && | + | && BMMCPYTY && with Thymine && 19 |
| − | && BMMCPYUR && with Uracil && | + | && BMMCPYUR && with Uracil && 49 |
&& BMMCPYXX && Others && 17 | && BMMCPYXX && Others && 17 | ||
&& BMMCIZ && with imidazole ring && 34 | && BMMCIZ && with imidazole ring && 34 | ||
| − | && BMMCTZ && with thiazole ring (thiamine) && | + | && BMMCTZ && with thiazole ring (thiamine) && 3 |
&& BMMCVA && with retinol ring (vitamin A) && 4 | && BMMCVA && with retinol ring (vitamin A) && 4 | ||
&& BMMCQN && with Quinone && 26 | && BMMCQN && with Quinone && 26 | ||
| Line 44: | Line 44: | ||
&& BMMCAC && alicyclic molecules && 54 | && BMMCAC && alicyclic molecules && 54 | ||
&& BMMCAS && assembled && 45 | && BMMCAS && assembled && 45 | ||
| − | && BMMCLA && with lacton && | + | && BMMCLA && with lacton && 17 |
| − | && '''BMCC''' && conjugated cyclic molecules && 437 | + | && '''BMCC''' && '''conjugated cyclic molecules''' && 437 |
&& BMCCPU && with purine ring (AXP, GXP, IXP, XXP, ...) && 232 | && BMCCPU && with purine ring (AXP, GXP, IXP, XXP, ...) && 232 | ||
&& BMCCPUCA && with CoA && 119 | && BMCCPUCA && with CoA && 119 | ||
| Line 57: | Line 57: | ||
&& BMCCPTFO && with Folic acid && 16 | && BMCCPTFO && with Folic acid && 16 | ||
&& BMCCPTPD && with Pteridine && 5 | && BMCCPTPD && with Pteridine && 5 | ||
| − | && BMCCPTPT && with Pterine && | + | && BMCCPTPT && with Pterine && 15 |
&& BMCCPP && with porphyrin ring (V12, cobalamine, heme) && 46 | && BMCCPP && with porphyrin ring (V12, cobalamine, heme) && 46 | ||
&& BMCCVE && with tocopherol ring (vitamin E) && 2 | && BMCCVE && with tocopherol ring (vitamin E) && 2 | ||
Revision as of 18:44, 13 March 2008
Category description
This page introduces a hierarchical classification of basic metabolites.
Last Classification
- phosphate
- di- or triphosphate
- with sugars
- with amino acids
- with alkyl chains
- with halogens (F, Cl, Br etc)
- with metals (Se, Te, Co etc)
- with sulfur
- with nitrogen
- with adenine
