| Colletotrichum lagenarium (GenBank BAA18956) all species
|
| Class
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NRPKS (length: 2187) all classes Class 11.NRPKS_I(4a)melanin in KS domain phylogeny
|
Reliability
|
identified
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| Product
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melanin
|
GeneName
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pks1
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| UniProt,UniRef90
|
[1] , [2]
|
UniRef50
|
[3]
|
| Domain by MAPSI
|
KS-AT-ACP-ACP-CYC
(notation help / all patterns)
|
| Domain by CDD
|
KS-AT-PP-PP-TE
(notation help / all patterns)
|
| Domain by ITER-DB
|
{{{ITERDB}}}
(notation help / all patterns)
|
| Estimated Domain
|
|
| Description
|
polyketide synthase [Colletotrichum lagenarium]
|
| Information
|
involved in melanin biosynthesis in Colletotrichum lagenarium. Possible domain architecture: SAT-KS-AT-PT-ACP-ACP-TE/CLC
|
| References
|
- Fisch KM, Gillaspy AF, Gipson M, Henrikson JC, Hoover AR, Jackson L, Najar FZ, Wagele H, Cichewicz RH: Chemical induction of silent biosynthetic pathway transcription in aspergillus niger. J Ind Microbiol Biotechnol 36(9):1199-1213, 2009
- Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
- Takano Y, Kubo Y, Shimizu K, Mise K, Okuno T, Furusawa I: Structural analysis of pks1, a polyketide synthase gene involved in melanin biosynthesis in colletotrichum lagenarium. Mol Gen Genet 249(2):162-167, 1995
- Valarmathi R, Hariharan GN, Venkataraman G, Parida A: Characterization of a non-reducing polyketide synthase gene from lichen dirinaria applanata. Phytochemistry 70(6):721-729, 2009
- Varga J, Rigo K, Kocsube S, Farkas B, Pal K: Diversity of polyketide synthase gene sequences in Aspergillus species. Res Microbiol 154:593-600, 2003
|
| Link
|
AspGD
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This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)
