Template:FL digit56
From Metabolomics.JP
(Difference between revisions)
| Line 18: | Line 18: | ||
{{Twocolumn| | {{Twocolumn| | ||
| − | The 5th and 6th digits of our flavonoid ID indicates the hydroxylation | + | The 5th and 6th digits of our flavonoid ID indicates the hydroxylation patterns of A-ring and B-ring (See the upper-right figure), respectively. The following chart is spanned by these 2 digits. R indicates H or CH<sub>3</sub>, and R' indicates H or R. Numbers are IUPAC positions.<br> |
The value in each cell (such as GS: glycosilation only) corresponds to the 7th and 8th digits, which is explained at the bottom of this page. | The value in each cell (such as GS: glycosilation only) corresponds to the 7th and 8th digits, which is explained at the bottom of this page. | ||
| | | | ||
| Line 207: | Line 207: | ||
==Glycosylation Patterns (糖修飾パターン)== | ==Glycosylation Patterns (糖修飾パターン)== | ||
| + | |||
| + | {{Twocolumn| | ||
| + | The 7th and 8th digits of the flavonoid ID indicates the glycosylation, and other modification patterns, respectively. The following chart is spanned by these 2 digits.<br> | ||
| + | The value in each cell (such as XX: glycosilation only) corresponds to the 5th and 6th digits. | ||
| + | | | ||
| + | フラボノイド ID の 7 桁目 8 桁目は 糖修飾, その他のパターンを 示しています。 以下の表は この 2 桁で分類されています。<br> | ||
| + | 表中の値 (例えば XX: 糖の結合のみ) は 5, 6 桁目に相当します。 | ||
| + | }} | ||
{| class="wikitable" border="1" cellpadding="1" cellspacing="1" margin: 1em 1em 1em 1em" | {| class="wikitable" border="1" cellpadding="1" cellspacing="1" margin: 1em 1em 1em 1em" | ||
Revision as of 18:27, 6 July 2008
Hydroxylation Patterns (水酸基パターン)
| Category Names in the 3rd Class | ||
|---|---|---|
|
The 5th and 6th digits of our flavonoid ID indicates the hydroxylation patterns of A-ring and B-ring (See the upper-right figure), respectively. The following chart is spanned by these 2 digits. R indicates H or CH3, and R' indicates H or R. Numbers are IUPAC positions.
The value in each cell (such as GS: glycosilation only) corresponds to the 7th and 8th digits, which is explained at the bottom of this page.
| Position of -OH (-OCH3) groups | 
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
| A | B | C | D | E | F | G | H | I | J | K | L | 8 | 9 | ||
 |
A | ||||||||||||||
 |
B | ||||||||||||||
 |
C | ||||||||||||||
 |
D | ||||||||||||||
 |
E | ||||||||||||||
 |
F | ||||||||||||||
 |
G | ||||||||||||||
 |
1 | ||||||||||||||
 |
2 | ||||||||||||||
 |
3 | ||||||||||||||
 |
4 | ||||||||||||||
 |
9 | ||||||||||||||
| First Character: | N not glycosylated | G O-glycoside | C C-glycoside | D both glycosides |
|---|---|---|---|---|
| Second Character: | S not modified | M alkylated | I prenylated | R cyclic-prenylated |
| F furanoFL | P pyranoFL | D furano and pyranoFL | N phenylpropanoid | C others |
Other Unusual Patterns (特殊な構造)
These types are not classified in the above chart.
| QU: Quinone | [[Special:Search&ns0=1&search={{{1}}}QU|QU (0 pages) ]] | HX: alpha-Hydroxy | [[Special:Search&ns0=1&search={{{1}}}HX|HX (0 pages) ]] | HY: beta-Hydroxy | [[Special:Search&ns0=1&search={{{1}}}HY|HY (0 pages) ]] | PT: Peltogynoid | [[Special:Search&ns0=1&search={{{1}}}PT|PT (0 pages) ]] |
| RT: Retrocalchone | [[Special:Search&ns0=1&search={{{1}}}RT|RT (0 pages) ]] | WX: Dehydro-backbone | [[Special:Search&ns0=1&search={{{1}}}WX|WX (0 pages) ]] | RN: Additional rings | [[Special:Search&ns0=1&search={{{1}}}RN|RN (0 pages) ]] | UN: Others | [[Special:Search&ns0=1&search={{{1}}}UN|UN (0 pages) ]] |
Glycosylation Patterns (糖修飾パターン)
The 7th and 8th digits of the flavonoid ID indicates the glycosylation, and other modification patterns, respectively. The following chart is spanned by these 2 digits.
The value in each cell (such as XX: glycosilation only) corresponds to the 5th and 6th digits.
| N: no glycosylation | G: O-glycoside | C: C-glycoside | D: O- & C-glycoside | |
| S: no modification | ||||
| M: alkylated | ||||
| I: prenylated | ||||
| R: cyclic prenylated | ||||
| F: furano FL | ||||
| P: pyrano FL | ||||
| D: furano & pyrano FL | ||||
| N: prenylpropanoid | ||||
| C: others |
