PKS:Fung065

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|geneName=hpm3  
 
|geneName=hpm3  
 
|MAPSI=KS-AT-ACP
 
|MAPSI=KS-AT-ACP
|CDD=KS-AT-PP-EL
+
|CDD=KS-AT-PP-TE
 
|class=NRPKS
 
|class=NRPKS
 
|reliability=
 
|reliability=

Revision as of 02:47, 13 April 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Hypomyces subiculosus (GenBank ACD39762) all species
Class NRPKS (length: 2049) all classes   Class 08.NRPKS_I_(1)_OAS-Like in KS domain phylogeny Reliability
Product hypocemycin GeneName hpm3
UniProt,UniRef90 [1] , [2] UniRef50 [3]
Domain by MAPSI KS-AT-ACP

(notation help / all patterns)

Domain by CDD KS-AT-PP-TE

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description non-reducing polyketide synthase [Hypomyces subiculosus]
Information
References
  • Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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