PKS:Fung036
From Metabolomics.JP
(Difference between revisions)
| Line 7: | Line 7: | ||
|geneName=pks1 | |geneName=pks1 | ||
|MAPSI=KS-AT-DH-KR-ACP | |MAPSI=KS-AT-DH-KR-ACP | ||
| − | |CDD=KS-AT-DH- | + | |CDD=KS-AT-DH-ER-KR-(PP)-Con-LuxE-PP-KR |
| − | |class= | + | |class=RPKS |
|reliability= | |reliability= | ||
| − | |description | + | |description=polyketide synthase [Gibberella moniliformis] |
| + | |information= CCD structure of Fung036 contains MDR domain. ER is belong to MDR family. MDR is taken as ER domain. | ||
|length=3650 | |length=3650 | ||
|references=\*Fisch.+2009$ | |references=\*Fisch.+2009$ | ||
}} | }} | ||
{{{{NAMESPACE}}/Footer}} | {{{{NAMESPACE}}/Footer}} | ||
Latest revision as of 01:15, 13 April 2012
| Polyketide Top | Species List | UniRef90 Class | UniRef50 Class | Gene Class | Domains (by CDD) |
Domains (by MAPSI) |
| Gibberella moniliformis (GenBank AAR92208) all species | |||
|---|---|---|---|
| Class | RPKS (length: 3650) all classes Class 30.NRPS-PKS_III(Equisetin-like) in KS domain phylogeny | Reliability | |
| Product | GeneName | pks1 | |
| UniProt,UniRef90 | [1] , [2] | UniRef50 | [3] |
| Domain by MAPSI | KS-AT-DH-KR-ACP | ||
| Domain by CDD | KS-AT-DH-ER-KR-(PP)-Con-LuxE-PP-KR | ||
| Domain by ITER-DB | {{{ITERDB}}} | ||
| Estimated Domain | |||
| Description | polyketide synthase [Gibberella moniliformis] | ||
| Information | CCD structure of Fung036 contains MDR domain. ER is belong to MDR family. MDR is taken as ER domain. | ||
| References |
| ||
| Link | AspGD | ||
This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)
