PKS:Aspni1:194381
From Metabolomics.JP
(Difference between revisions)
(Created page with "{{{{NAMESPACE}}/Header}} {{PKSinfo |species=Aspergillus niger ATCC 1015 |taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomyceta; Pezizomycotina; Leotiomyceta; Eurotiomyce...") |
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|geneName= | |geneName= | ||
|MAPSI=KS-AT-ACP | |MAPSI=KS-AT-ACP | ||
| − | |CDD= | + | |CDD=KS-AT-(DH)-PP-ME |
|ITERDB=KS-AT-ACP | |ITERDB=KS-AT-ACP | ||
|InferredDomain=SAT-KS-AT-PT-ACP-ME | |InferredDomain=SAT-KS-AT-PT-ACP-ME | ||
| Line 16: | Line 16: | ||
|reliability=identified | |reliability=identified | ||
|description= | |description= | ||
| − | |information=EHA28527.1 may be the corresponding GenBank ID of Aspni1:194381. No homolog in A. niger CBS 513.88. Gene ID in Broad insitute=[http://fungicyc.broadinstitute.org:1555/ANIG1/NEW-IMAGE?type=GENE&object=G4U-6617 e_gw1_19.204] | + | |information=EHA28527.1 may be the corresponding GenBank ID of Aspni1:194381. No homolog in A. niger CBS 513.88. Gene ID in Broad insitute=[http://fungicyc.broadinstitute.org:1555/ANIG1/NEW-IMAGE?type=GENE&object=G4U-6617 e_gw1_19.204]. DH domain from CDD is incomplete. |
|length=2104 | |length=2104 | ||
|references=\*Fisch.+2009$~\*Ahuja.+2012$ | |references=\*Fisch.+2009$~\*Ahuja.+2012$ | ||
}} | }} | ||
{{{{NAMESPACE}}/Footer}} | {{{{NAMESPACE}}/Footer}} | ||
Latest revision as of 21:45, 15 May 2012
| Polyketide Top | Species List | UniRef90 Class | UniRef50 Class | Gene Class | Domains (by CDD) |
Domains (by MAPSI) |
| Aspergillus niger ATCC 1015 (GenBank EHA20911.1) all species | |||
|---|---|---|---|
| Class | NRPKS (length: 2104) all classes Class in KS domain phylogeny | Reliability | identified |
| Product | GeneName | ||
| UniProt,UniRef90 | [1] , [2] | UniRef50 | [3] |
| Domain by MAPSI | KS-AT-ACP | ||
| Domain by CDD | KS-AT-(DH)-PP-ME | ||
| Domain by ITER-DB | KS-AT-ACP | ||
| Estimated Domain | SAT-KS-AT-PT-ACP-ME | ||
| Description | |||
| Information | EHA28527.1 may be the corresponding GenBank ID of Aspni1:194381. No homolog in A. niger CBS 513.88. Gene ID in Broad insitute=e_gw1_19.204. DH domain from CDD is incomplete. | ||
| References |
| ||
| Link | AspGD | ||
This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)
