PKS:APar03*

From Metabolomics.JP
(Difference between revisions)
Jump to: navigation, search
Line 14: Line 14:
 
|reliability=
 
|reliability=
 
|description=polyketide synthase [Aspergillus parasiticus]
 
|description=polyketide synthase [Aspergillus parasiticus]
|information=
+
|information=ITRDB=KS-AT-ACP-CYC. Inferred domain architecture: SAT-KS-AT-PT-ACP-TE/CLC.
 
|length=2109
 
|length=2109
 
|references=\*Li.+2010$
 
|references=\*Li.+2010$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Revision as of 12:11, 10 May 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus parasiticus (GenBank AAS66004) all species
Class NRPKS (length: 2109) all classes   Class in KS domain phylogeny Reliability
Product aflatoxin GeneName pksA/aflC
UniProt,UniRef90 Q6UEH2 , Q12053 UniRef50 Q12053
Domain by MAPSI KS-AT-ACP-CYC

(notation help / all patterns)

Domain by CDD KS-AT-PP-TE

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description polyketide synthase [Aspergillus parasiticus]
Information ITRDB=KS-AT-ACP-CYC. Inferred domain architecture: SAT-KS-AT-PT-ACP-TE/CLC.
References
  • Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

Personal tools
Namespaces

Variants
Actions
Navigation
metabolites
Toolbox