PKS:AN7909
From Metabolomics.JP
(Difference between revisions)
| Line 10: | Line 10: | ||
|geneName= | |geneName= | ||
|MAPSI=KS-AT-ACP-ACP-CYC | |MAPSI=KS-AT-ACP-ACP-CYC | ||
| − | |CDD=KS-AT-DH-PP-PP-TE | + | |CDD=KS-AT-(DH)-PP-PP-TE |
|ITERDB=KS-AT-ACP-ACP-CYC | |ITERDB=KS-AT-ACP-ACP-CYC | ||
|InferredDomain=SAT-KS-AT-PT-ACP-ACP-TE | |InferredDomain=SAT-KS-AT-PT-ACP-ACP-TE | ||
| − | |class= | + | |class=NRPKS |
|reliability= | |reliability= | ||
|description=hypothetical protein AN7909.2 [Aspergillus nidulans FGSC A4] | |description=hypothetical protein AN7909.2 [Aspergillus nidulans FGSC A4] | ||
| − | |information=ANIA07909 is possibly classified into NRPKS. | + | |information=ANIA07909 is possibly classified into NRPKS.Because it's DH domain is incomplete and short( 77 aa). Although it contains DH domain, it might belong NRPKS. |
|length=2103 | |length=2103 | ||
|references=\*Li.+2010$~\*Ahuja.+2012$ | |references=\*Li.+2010$~\*Ahuja.+2012$ | ||
}} | }} | ||
{{{{NAMESPACE}}/Footer}} | {{{{NAMESPACE}}/Footer}} | ||
Revision as of 17:07, 27 May 2012
| Polyketide Top | Species List | UniRef90 Class | UniRef50 Class | Gene Class | Domains (by CDD) |
Domains (by MAPSI) |
| Aspergillus nidulans FGSC A4 (GenBank XP_681178) all species | |||
|---|---|---|---|
| Class | NRPKS (length: 2103) all classes Class in KS domain phylogeny | Reliability | |
| Product | orsellinic acid (sterigmatocystin) | GeneName | |
| UniProt,UniRef90 | C8V4V0 , C8V4V0 | UniRef50 | C8V4V0 |
| Domain by MAPSI | KS-AT-ACP-ACP-CYC | ||
| Domain by CDD | KS-AT-(DH)-PP-PP-TE | ||
| Domain by ITER-DB | KS-AT-ACP-ACP-CYC | ||
| Estimated Domain | SAT-KS-AT-PT-ACP-ACP-TE | ||
| Description | hypothetical protein AN7909.2 [Aspergillus nidulans FGSC A4] | ||
| Information | ANIA07909 is possibly classified into NRPKS.Because it's DH domain is incomplete and short( 77 aa). Although it contains DH domain, it might belong NRPKS. | ||
| References |
| ||
| Link | AspGD | ||
This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)
