PKS:ACLA 043310

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Line 11: Line 11:
 
|MAPSI=KS-AT-ACP
 
|MAPSI=KS-AT-ACP
 
|CDD=KS-AT-PP
 
|CDD=KS-AT-PP
 +
|ITERDB=KS-AT-ACP
 +
|InferredDomain=SAT-KS-AT-PT-ACP
 
|class=NRPKS
 
|class=NRPKS
 
|reliability=putative  
 
|reliability=putative  
 
|description=polyketide synthase-putative [Aspergillus clavatus NRRL 1]
 
|description=polyketide synthase-putative [Aspergillus clavatus NRRL 1]
|information=polyketide synthase-putative-acl1.287.m001315 3345 0.0 95 - 100% aoa1.20200.m00444 syntenic 2310 0.0 66% afl1.2689.m00524 2010 0.0 68% nfa1.9105.m001041 1716 0.0 49% afu1.109.m00134 1714 0.0 49% afu2.11.m00012 1710 0.0 49% ana1.10005.m00157 1452 0.0 43%-predicted by EVM2?
+
|information=
 
|length=1749
 
|length=1749
|references=\*Li.+2010$
+
|references=\*Li.+2010$~\*Ahuja.+2012$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Latest revision as of 13:39, 15 May 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus clavatus NRRL 1 (GenBank XP_001275038) all species
Class NRPKS (length: 1749) all classes   Class 09.NRPKS_I(2) in KS domain phylogeny Reliability putative
Product GeneName
UniProt,UniRef90 A1C8H5 , A1C8H5 UniRef50 Q8TGD6
Domain by MAPSI KS-AT-ACP

(notation help / all patterns)

Domain by CDD KS-AT-PP

(notation help / all patterns)

Domain by ITER-DB KS-AT-ACP

(notation help / all patterns)

Estimated Domain SAT-KS-AT-PT-ACP
Description polyketide synthase-putative [Aspergillus clavatus NRRL 1]
Information
References
  • Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012
  • Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
Link 043310 AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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