Category:TP

From Metabolomics.JP
(Difference between revisions)
Jump to: navigation, search
m (Biosynthesis)
m (History)
Line 19: Line 19:
 
{{Twocolumn|
 
{{Twocolumn|
 
The German chemist Otto Wallach proposed the construction of terpenes from isoprene units  known as the ''isoprene rule'' (1887), and received [http://nobelprize.org/nobel_prizes/chemistry/laureates/1910/wallach-lecture.html the Nobel Prize in Chemistry in 1910].
 
The German chemist Otto Wallach proposed the construction of terpenes from isoprene units  known as the ''isoprene rule'' (1887), and received [http://nobelprize.org/nobel_prizes/chemistry/laureates/1910/wallach-lecture.html the Nobel Prize in Chemistry in 1910].
In 1930s Leopold Ruzicka rationalized the reaction mechanisms of isoprene units and proposed the ''biogenetic isoprene rule'', in which all compounds derived from ''active'' isoprene units should be included as terpenes. He received [http://nobelprize.org/nobel_prizes/chemistry/laureates/1939/ruzicka-lecture.html the Nobel Prize in Chemistry in 1939].
+
In 1930s Leopold Ruzicka rationalized the reaction mechanisms of isoprene units and proposed the ''biogenetic isoprene rule'', in which all compounds derived from ''active'' isoprene units should be included as terpenes. This active isoprene is now known as isopentenyl di- (or pyro-) phosphate (IPP). He received [http://nobelprize.org/nobel_prizes/chemistry/laureates/1939/ruzicka-lecture.html the Nobel Prize in Chemistry in 1939].
 
|
 
|
 
ドイツの化学者オットー・ヴァラッハは、テルペンがイソプレン単位から構成されること(イソプレン則)を示し、[http://nobelprize.org/nobel_prizes/chemistry/laureates/1910/wallach-lecture.html 1910年ノーベル化学賞]を受賞した。
 
ドイツの化学者オットー・ヴァラッハは、テルペンがイソプレン単位から構成されること(イソプレン則)を示し、[http://nobelprize.org/nobel_prizes/chemistry/laureates/1910/wallach-lecture.html 1910年ノーベル化学賞]を受賞した。
 
1930年代にスイスのレオポルド・ルジツカがイソプレン単位の反応機構を整理し、反応性の高いイソプレンの生体内反応による産物を全てテルペンとするイソプレン生合成則を示した。
 
1930年代にスイスのレオポルド・ルジツカがイソプレン単位の反応機構を整理し、反応性の高いイソプレンの生体内反応による産物を全てテルペンとするイソプレン生合成則を示した。
 +
反応性の高いイソプレンとは、イソペンテニル二リン酸 (isopentenyl pyrophosphate: IPP) であることが現在わかっている。
 
ルジツカはこの業績により[http://nobelprize.org/nobel_prizes/chemistry/laureates/1939/ruzicka-lecture.html 1937年ノーベル化学賞]を受賞した。<ref>[http://www.springerlink.com/content/nrmg1jpq1454663p/ Ruzicka, L "The isoprene rule and the biogenesis of terpenic compounds" ''Cell. Mol. Life Sci.'' 9(10): 357-367, 1953]</ref>
 
ルジツカはこの業績により[http://nobelprize.org/nobel_prizes/chemistry/laureates/1939/ruzicka-lecture.html 1937年ノーベル化学賞]を受賞した。<ref>[http://www.springerlink.com/content/nrmg1jpq1454663p/ Ruzicka, L "The isoprene rule and the biogenesis of terpenic compounds" ''Cell. Mol. Life Sci.'' 9(10): 357-367, 1953]</ref>
 
}}
 
}}

Revision as of 12:21, 22 July 2010

Contents

Terpenes

Overview

The word 'terpene' originates from turpentine, the distillation of resin from pine trees (Pinaceae). Chemically speaking, terpenes or terpenoids refer to all natural compounds build up from isoprene (C5) units. For this reason, terpenes are also called isoprenoids. <p>Well known terpenes include myrrh from balm trees, fragrance or essential oils of herbs and roses. Biologically, terpenes function as volatile expellant of herbivores and attractant of pollinators, or less volatile bitter antifeedants. Many hormones, pheromones and signal compounds are also derived from terpenes.

History

The German chemist Otto Wallach proposed the construction of terpenes from isoprene units known as the isoprene rule (1887), and received the Nobel Prize in Chemistry in 1910. In 1930s Leopold Ruzicka rationalized the reaction mechanisms of isoprene units and proposed the biogenetic isoprene rule, in which all compounds derived from active isoprene units should be included as terpenes. This active isoprene is now known as isopentenyl di- (or pyro-) phosphate (IPP). He received the Nobel Prize in Chemistry in 1939.


Classification

Depending on the number of isoprene units used, terpenoids are classified as follows.

  • hemi-terpenes (C5)
  • mono- (C10)
  • sesqui- (C15)
  • di- (C20)
  • sester- (C25)
  • tri- (C30)
  • tetra- (C40)
  • poly- (C5)n (n > 8)

Biosynthesis

  • (h-t) ... head-to-tail conjugation
  • (t-t) ... tail-to-tail conjugation
hemiterpenes C5 Arrow00r.png e.g. ester alkaloids
+C5 Arrow00d35.png (h-t)
monoterpenes C10 Arrow00r.png e.g. indole alkaloids, cannabinoids
+C5 Arrow00d35.png(h-t)
sesquiterpenes C15 x2
Arrow00r.png
(t-t)
  C30   triterpenes Arrow00r35.png steroids
+C5 Arrow00d35.png(h-t)
diterpenes C20 x2
Arrow00r.png
(t-t)
  C40   tetraterpenes Arrow00r35.png carotenoids
+C5 Arrow00d35.png(h-t)
sesterterpenes C25

Design of Di-terpene ID numbers ID番号の設計

12-DIGIT

T P 2

Design of Tri-terpene ID numbers ID番号の設計

12-DIGIT

T P 3 x y y r h g n c c
x ... species information
Symbol at x Kingdom Phyla Examples
I Animalia Arthropoda (Insects, crabs) ecdysteroids
V Chordate (Vertebrates) sex steroids, corticosteroids, anabolic steroids
O Others marine steroids
P Plantae Phytosterols lanosterols, cholesterols, brassinolides
S Saponins saponins
F Fungi ergosterols ergosterols
B Bacteria bacterial sterols hopanoids
y ... backbone structure (母核構造) 
Symbol at y Carbons Steroids
GN C17 gonane Gonane.png
ES C18 estrane Estrane.png
AD C19 androstane Androstane.png
PG C21 pregnane Pregnane.png
CA C24 cholane Cholane.png
CL C27 cholestane Cholestane.png
CM C28 campestane Campestane.png
EG C28 ergostane Ergostane.png
SG C29 (4 rings) stigmastane Stigmastane.png
PR C29 (4 rings) poriferastane Poriferastane.png
Symbol at y Carbons (Plant) Triterpenes
LN C30 (4 rings) lanostane Lanostane.png
CY C30 (4 rings) cycloartane Cycloartane.png
BC C30 (4 rings) baccharane Baccharane.png
CC C30 (4 rings) cucurbitane Cucurbitane.png
DM C30 (4 rings) dammarane Dammarane.png
HL C30 (4 rings) holostane File:Holostane .png
PF C29 (5 rings) pfaffane Pfaffane.png
HP C30 (5 rings) hopane Hopane.png
LP C30 (5 rings) lupane Lupane.png
OL C30 (5 rings) oleanane Oleanane.png
SR C30 (5 rings) serratane Serratane.png
TR C30 (5 rings) taraxastane Taraxastane.png
UR C30 (5 rings) ursane Ursane.png
r ... number of major rings (環構造数) 

Click above categories to see details.

h ... hydroxylation pattern (水酸基数) 

Click above categories to see details.

g ... glycosylation pattern(糖修飾パターン) 

Click above categories to see details.

n ... number of sugars (修飾糖数) 

Click above categories to see details.

c ... serial number (通し番号)

This category currently contains no pages or media.

Personal tools
Namespaces

Variants
Actions
Navigation
metabolites
Toolbox