Category:TP
From Metabolomics.JP
(Difference between revisions)
m |
|||
Line 6: | Line 6: | ||
}} | }} | ||
− | ==Design of | + | ==Design of Triterpene ID numbers ID番号の設計== |
<center> | <center> | ||
12-DIGIT | 12-DIGIT | ||
Line 13: | Line 13: | ||
<td style="background-color:green;" width=15px align="center"><big>T</big> | <td style="background-color:green;" width=15px align="center"><big>T</big> | ||
<td style="background-color:green;" width=15px align="center"><big>P</big> | <td style="background-color:green;" width=15px align="center"><big>P</big> | ||
− | <td style="background-color: | + | <td style="background-color:green;" width=15px align="center"><big>3</big> |
<td style="background-color:darkseagreen;" width=15px align="center"><big>''x''</big> | <td style="background-color:darkseagreen;" width=15px align="center"><big>''x''</big> | ||
<td style="background-color:tomato;" width=15px align="center"><big>''y''</big> | <td style="background-color:tomato;" width=15px align="center"><big>''y''</big> | ||
Line 19: | Line 19: | ||
<td style="background-color:firebrick;" width=15px align="center"><big>''r''</big> | <td style="background-color:firebrick;" width=15px align="center"><big>''r''</big> | ||
<td style="background-color:firebrick;" width=15px align="center"><big>''h''</big> | <td style="background-color:firebrick;" width=15px align="center"><big>''h''</big> | ||
− | <td style="background-color: | + | <td style="background-color:orange;" width=15px align="center"><big>''g''</big> |
− | <td style="background-color: | + | <td style="background-color:orange;" width=15px align="center"><big>''n''</big> |
<td style="background-color:white;" width=15px align="center"><big>''c''</big> | <td style="background-color:white;" width=15px align="center"><big>''c''</big> | ||
<td style="background-color:white;" width=15px align="center"><big>''c''</big> | <td style="background-color:white;" width=15px align="center"><big>''c''</big> | ||
Line 28: | Line 28: | ||
; ''x'' ... species information: | ; ''x'' ... species information: | ||
{| class="wikitable" | {| class="wikitable" | ||
− | ! | + | ! Symbol at ''x'' || Kingdom || Phyla || Examples |
|- | |- | ||
− | | '' | + | |align="center"| '''C''' |
+ | | All | ||
+ | | [[:Category:TPC|common structures]] | ||
+ | |||
+ | | lanosterol, cholesterol | ||
|- | |- | ||
− | | '' | + | |align="center"| '''I''' |
− | | | + | |rowspan="3"| Animalia |
+ | | [[:Category:TPI|Arthropoda]] (insects, crabs) | ||
+ | | ecdysteroids | ||
|- | |- | ||
− | | '' | + | |align="center"| '''V''' |
+ | | [[:Category:TPV|Chordate]] (vertebrates) | ||
+ | | sex steroids, corticosteroids, anabolic steroids | ||
|- | |- | ||
− | | '' | + | |align="center"| '''O''' |
+ | | [[:Category:TPO|others]] | ||
+ | | marine steroids | ||
|- | |- | ||
− | | '' | + | |align="center"| '''P''' |
− | | | + | |rowspan="2"| Plantae |
+ | | [[:Category:TPP|phytosterols]] | ||
+ | | phytosterols, brassinolides | ||
|- | |- | ||
− | | '' | + | |align="center"| '''S''' |
+ | | [[:Category:TPS|saponins]] | ||
+ | | saponins | ||
|- | |- | ||
− | | '' | + | |align="center"| '''F''' |
+ | | Fungi | ||
+ | | [[:Category:TPF|ergosterols]] | ||
+ | | ergosterols | ||
|- | |- | ||
− | | '' | + | |align="center"| '''B''' |
+ | | Bacteria | ||
+ | | [[:Category:TPB|bacterial sterols]] | ||
+ | | hopanoids | ||
|} | |} | ||
; ''y'' ... backbone structure (母核構造) : | ; ''y'' ... backbone structure (母核構造) : | ||
− | {| | + | <table><tr valign="top"><td> |
+ | {| class="wikitable sortable" | ||
+ | ! Symbol at ''y'' || Carbons || Steroidal | ||
|- | |- | ||
− | + | | ''GN'' | |
+ | | C17 || gonane | ||
|- | |- | ||
− | + | | ''ES'' | |
+ | | C18 || estrane | ||
|- | |- | ||
− | + | | ''AD'' | |
+ | | C19 || androstane | ||
|- | |- | ||
− | | C21 || '' | + | | ''PG'' |
+ | | C21 || pregnane | ||
+ | |- | ||
+ | | ''CA'' | ||
+ | | C24 || cholane | ||
+ | |- | ||
+ | | ''CL'' | ||
+ | | C27 || cholestane | ||
+ | |- | ||
+ | | ''CM'' | ||
+ | | C28 || campestane | ||
+ | |- | ||
+ | | ''EG'' | ||
+ | | C28 || ergostane | ||
+ | |- | ||
+ | | ''SG'' | ||
+ | | C29 (4 rings) || stigmastane | ||
+ | |- | ||
+ | | ''PR'' | ||
+ | | C29 (4 rings) || poriferastane | ||
+ | |}</td><td> | ||
+ | {| class="wikitable sortable" | ||
+ | ! Symbol at ''y'' || Carbons || Plant-derived | ||
+ | |- | ||
+ | | ''LN'' | ||
+ | | C30 (4 rings) || lanostane | ||
+ | |- | ||
+ | | ''CY'' | ||
+ | | C30 (4 rings) ||cycloartane | ||
+ | |- | ||
+ | | ''BC'' | ||
+ | | C30 (4 rings) ||baccharane | ||
+ | |- | ||
+ | | ''CC'' | ||
+ | | C30 (4 rings) ||cucurbitane | ||
+ | |- | ||
+ | | ''DM'' | ||
+ | | C30 (4 rings) ||dammarane | ||
+ | |- | ||
+ | | ''HL'' | ||
+ | | C30 (4 rings) ||holostane | ||
|- | |- | ||
− | + | | ''PF'' | |
+ | | C29 (5 rings) || pfaffane | ||
|- | |- | ||
− | + | | ''HP'' | |
+ | | C30 (5 rings) || hopane | ||
|- | |- | ||
− | + | | ''LP'' | |
+ | | C30 (5 rings) || lupane | ||
|- | |- | ||
− | | | + | | ''OL'' |
+ | | C30 (5 rings) || oleanane | ||
|- | |- | ||
− | | | + | | ''SR'' |
+ | | C30 (5 rings) || serratane | ||
|- | |- | ||
− | | C30 ( | + | | ''TR'' |
+ | | C30 (5 rings) || taraxastane | ||
|- | |- | ||
− | | C30 (5 rings) || | + | | ''UR'' |
+ | | C30 (5 rings) || ursane | ||
|} | |} | ||
+ | </td></tr></table> | ||
; ''r'' ... number of major rings (環構造数) : | ; ''r'' ... number of major rings (環構造数) : |
Revision as of 09:17, 21 July 2010
Triterpenes
Triterpenes are synthesized from squalene, which is formed by tail-to-tail conjugation of two farnesyl biphosphates (FPP), formed from mevalonate.
Design of Triterpene ID numbers ID番号の設計
12-DIGIT
T | P | 3 | x | y | y | r | h | g | n | c | c |
- x ... species information
Symbol at x | Kingdom | Phyla | Examples |
---|---|---|---|
C | All | common structures | lanosterol, cholesterol |
I | Animalia | Arthropoda (insects, crabs) | ecdysteroids |
V | Chordate (vertebrates) | sex steroids, corticosteroids, anabolic steroids | |
O | others | marine steroids | |
P | Plantae | phytosterols | phytosterols, brassinolides |
S | saponins | saponins | |
F | Fungi | ergosterols | ergosterols |
B | Bacteria | bacterial sterols | hopanoids |
- y ... backbone structure (母核構造)
|
|
- r ... number of major rings (環構造数)
Click above categories to see details.
- h ... hydroxylation pattern (水酸基数)
Click above categories to see details.
- g ... glycosylation pattern(糖修飾パターン)
Click above categories to see details.
- n ... number of sugars (修飾糖数)
Click above categories to see details.
- c ... serial number (通し番号)
This category currently contains no pages or media.