Help:Contents
From Metabolomics.JP
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| − | == How to Cite Us == | + | =={{Bilingual|このサイトについて|About Us}}== |
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| + | This site is created, edited, and maintained by Arita Laboratory, Department of Biophysics and Biochemistry, Graduate School of Science, The University of Tokyo. | ||
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| + | このサイトは、東京大学大学院理学系研究科生物化学専攻の有田研究室によって開設、編集、運営されています。 | ||
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| + | =={{Bilingual|引用のしかた|How to Cite Us}}== | ||
{{Twocolumn| | {{Twocolumn| | ||
If you are interested in our Wiki-based database (including ''persist'' and ''volatile'' functions), please read [http://www.biodatamining.org/content/1/1/7 our paper in ''BioData Mining'']. If you are interested in the classification strategy of flavonoid or other metabolites, please wait for our paper in preparation. | If you are interested in our Wiki-based database (including ''persist'' and ''volatile'' functions), please read [http://www.biodatamining.org/content/1/1/7 our paper in ''BioData Mining'']. If you are interested in the classification strategy of flavonoid or other metabolites, please wait for our paper in preparation. | ||
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データ管理方法（Wikiを用いたデータベース一般）に興味のある方は、以下のBioData Mining誌をご覧ください。もしフラボノイドや他の化合物群に関する分類ストラテジーに興味がある方は、現在準備中の論文をお待ちください。 | データ管理方法（Wikiを用いたデータベース一般）に興味のある方は、以下のBioData Mining誌をご覧ください。もしフラボノイドや他の化合物群に関する分類ストラテジーに興味がある方は、現在準備中の論文をお待ちください。 | ||
}} | }} | ||
| − | ===About this database=== | + | ==={{Bilingual|データベースについて|About this database}}=== |
* Arita M., Suwa K. [http://www.biodatamining.org/content/1/1/7/ "Search Extension Transforms Wiki into a Relational System: a case for flavonoid metabolite database", ''BioData Mining'' 1:7, 2008] | * Arita M., Suwa K. [http://www.biodatamining.org/content/1/1/7/ "Search Extension Transforms Wiki into a Relational System: a case for flavonoid metabolite database", ''BioData Mining'' 1:7, 2008] | ||
| − | ===About Flavonoid classification=== | + | ==={{Bilingual|フラボノイド分類について|About Flavonoid classification}}=== |
* Tokimatsu T., Arita M. "Viewing Flavonoid Through Metabolic Maps." ''Saibou Kougaku (in Japanese)'', 25(12):1388-1393, 2006 | * Tokimatsu T., Arita M. "Viewing Flavonoid Through Metabolic Maps." ''Saibou Kougaku (in Japanese)'', 25(12):1388-1393, 2006 | ||
* Arita M., Tokimatsu T. "Detection of Monosaccharide Types from Coordinates" ''Proceedings of the 18th International Conference on Genome Informatics (Genome Informatics Series Vol.19)'', Singapore, 3-14, 2007 [PMID 18546500] | * Arita M., Tokimatsu T. "Detection of Monosaccharide Types from Coordinates" ''Proceedings of the 18th International Conference on Genome Informatics (Genome Informatics Series Vol.19)'', Singapore, 3-14, 2007 [PMID 18546500] | ||
| − | == | + | =={{Bilingual|スタッフ|Staff}}== |
{{Twocolumn| | {{Twocolumn| | ||
We are the only people! Currently, this site is write protected. | We are the only people! Currently, this site is write protected. | ||
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このスタッフで全てを作成しています。一般からの書き込みは現在許していません。 | このスタッフで全てを作成しています。一般からの書き込みは現在許していません。 | ||
}} | }} | ||
| − | ===Current=== | + | ==={{Bilingual|現在|Current}}=== |
* [http://metabolome.jp/aboutUs/aritalab/members/arita/ Masanori Arita Ph.D (principal investigator)] | * [http://metabolome.jp/aboutUs/aritalab/members/arita/ Masanori Arita Ph.D (principal investigator)] | ||
* Kazuhiro Suwa (programmer) | * Kazuhiro Suwa (programmer) | ||
* Miwa Yoshimoto (data curator) | * Miwa Yoshimoto (data curator) | ||
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| − | ===Past=== | + | ==={{Bilingual|過去|Past}}=== |
* Toshiaki Tokimatsu, Ph.D | * Toshiaki Tokimatsu, Ph.D | ||
* Yukiko Nakanishi | * Yukiko Nakanishi | ||
* Yukiko Fujiwara | * Yukiko Fujiwara | ||
| + | * Tadashi Gambe | ||
| − | == | + | =={{Bilingual|研究助成|Funding}}== |
* Grant-in-Aid for Scientific Research on Priority Areas "Systems Genomics" from Ministry of Education, Culture, Sports, Science and Technology, Japan (文部科学省科研費補助金 特定領域研究ゲノム「システム生命情報」 | * Grant-in-Aid for Scientific Research on Priority Areas "Systems Genomics" from Ministry of Education, Culture, Sports, Science and Technology, Japan (文部科学省科研費補助金 特定領域研究ゲノム「システム生命情報」 | ||
* Institute for Bioinformatics Research and Development, Japan Science and Technology Agency, Japan （JST-BIRD) | * Institute for Bioinformatics Research and Development, Japan Science and Technology Agency, Japan （JST-BIRD) | ||
* Precursory Research for Embryonic Science and Technology, Japan Science and Technology Agency, Japan (JSTさきがけ [http://www.jst.go.jp/kisoken/presto/ja/kenkyu/simulation.html シミュレーション技術の革新と実用化基盤の構築]) | * Precursory Research for Embryonic Science and Technology, Japan Science and Technology Agency, Japan (JSTさきがけ [http://www.jst.go.jp/kisoken/presto/ja/kenkyu/simulation.html シミュレーション技術の革新と実用化基盤の構築]) | ||
| − | == System Organization | + | =={{Bilingual|システム構成|System Organization}}== |
{{twocolumn| | {{twocolumn| | ||
This site is build on [http://www.mediawiki.org/ MediaWiki]. Total number of data pages is {{#VAR:NumberOfDataPages}}. | This site is build on [http://www.mediawiki.org/ MediaWiki]. Total number of data pages is {{#VAR:NumberOfDataPages}}. | ||
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* [[Doc:Extensions|サイト独自の機能拡張]] | * [[Doc:Extensions|サイト独自の機能拡張]] | ||
}} | }} | ||
| − | ===Source code of our site specific extensions=== | + | ==={{Bilingual|ソースコード| Source code of our site specific extensions}}=== |
* [[Help:Extension/Volatile|Volatile namespace]] | * [[Help:Extension/Volatile|Volatile namespace]] | ||
* [[Help:Extension/Persistency|Persist namespace]] | * [[Help:Extension/Persistency|Persist namespace]] | ||
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| − | ==For Administrators== | + | =={{Bilingual|管理者用|For Administrators}}== |
* [[Help:Maintenance| Maintenance page]] | * [[Help:Maintenance| Maintenance page]] | ||
* [http://metabolomics.jp/awstats/awstats.pl?config=metabolomics.jp Access Statistics] | * [http://metabolomics.jp/awstats/awstats.pl?config=metabolomics.jp Access Statistics] | ||
Revision as of 16:24, 17 August 2010
Contents |
About Us
This site is created, edited, and maintained by Arita Laboratory, Department of Biophysics and Biochemistry, Graduate School of Science, The University of Tokyo.
How to Cite Us
If you are interested in our Wiki-based database (including persist and volatile functions), please read our paper in BioData Mining. If you are interested in the classification strategy of flavonoid or other metabolites, please wait for our paper in preparation.
About this database
- Arita M., Suwa K. "Search Extension Transforms Wiki into a Relational System: a case for flavonoid metabolite database", BioData Mining 1:7, 2008
About Flavonoid classification
- Tokimatsu T., Arita M. "Viewing Flavonoid Through Metabolic Maps." Saibou Kougaku (in Japanese), 25(12):1388-1393, 2006
- Arita M., Tokimatsu T. "Detection of Monosaccharide Types from Coordinates" Proceedings of the 18th International Conference on Genome Informatics (Genome Informatics Series Vol.19), Singapore, 3-14, 2007 [PMID 18546500]
Staff
We are the only people! Currently, this site is write protected.
Current
- Masanori Arita Ph.D (principal investigator)
- Kazuhiro Suwa (programmer)
- Miwa Yoshimoto (data curator)
Past
- Toshiaki Tokimatsu, Ph.D
- Yukiko Nakanishi
- Yukiko Fujiwara
- Tadashi Gambe
Funding
- Grant-in-Aid for Scientific Research on Priority Areas "Systems Genomics" from Ministry of Education, Culture, Sports, Science and Technology, Japan (文部科学省科研費補助金 特定領域研究ゲノム「システム生命情報」
- Institute for Bioinformatics Research and Development, Japan Science and Technology Agency, Japan （JST-BIRD)
- Precursory Research for Embryonic Science and Technology, Japan Science and Technology Agency, Japan (JSTさきがけ シミュレーション技術の革新と実用化基盤の構築)
System Organization
This site is build on MediaWiki. Total number of data pages is 0.
Source code of our site specific extensions
- Volatile namespace
- Persist namespace
- Form tag in HTML
- Wbr tag in HTML
- SQL-like search
- String functions
- Calling Lua program
- MOL-format file functions
- Graph drawing
