PKS:Bact18

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|information=http://avermitilis.ls.kitasato-u.ac.jp
 
|information=http://avermitilis.ls.kitasato-u.ac.jp
 
|length=5532
 
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|references=\*Schmitt.+2009$
 
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Revision as of 14:30, 6 April 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Streptomyces avermitilis MA-4680 (GenBank BAC68652) all species
Class PRPKS (length: 5532) all classes   Class 02.NRPS-PKS(NFC) in KS domain phylogeny Reliability
Product avermectin GeneName aveA3
UniProt,UniRef90 [1] , [2] UniRef50 [3]
Domain by MAPSI KS-AT-DH-KR-ACP-KS-AT-DH-KR-ACP-KS-AT-DH-KR-ACP

(notation help / all patterns)

Domain by CDD KS-AT-DH-KR-PP-KS-AT-DH-KR-PP-KS-AT-DH-KR-PP

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description multiple modular type I polyketide synthase AVES 3 [Streptomyces avermitilis MA-4680]
Information http://avermitilis.ls.kitasato-u.ac.jp
References
  • Schmitt I, Lumbsch HT: Ancient horizontal gene transfer from bacteria enhances biosynthetic capabilities of fungi. PLoS One 4:e4437, 2009
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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