PKS:ACLA 061390

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Line 10: Line 10:
 
|geneName=
 
|geneName=
 
|MAPSI=KS-AT-ACP
 
|MAPSI=KS-AT-ACP
|CDD=KS-AT-PP-ME-(Aes)-(DAP2)
+
|CDD=(KS)-AT-(PP)-ME-(Aes)-(DAP2)
 +
|ITERDB=KS-AT-ACP
 +
|InferredDomain=KS-AT-PT-ACP-ME-TE
 
|class=NRPKS
 
|class=NRPKS
 
|reliability=putative  
 
|reliability=putative  
 
|description=polyketide synthase-putative [Aspergillus clavatus NRRL 1]
 
|description=polyketide synthase-putative [Aspergillus clavatus NRRL 1]
|information=incompleted KS �Bpolyketide synthase-putative-acl1.322.m002481 3548 0.0 pca1.16.m15635 919 0.0 35% ana1.10153.m00136 873 0.0 34% ana1.10108.m00183 598 e-170-predicted by EVM2 similar to polyketide synthase PKS18 (GI:40787360) (Botryotinia fuckeliana) PUBMED = 14676319?
+
|information=KS, PP, Aes and DAP2 are incomplete from CDD identification.
 
|length=1914
 
|length=1914
 +
|references=\*Ahuja.+2012$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Latest revision as of 22:07, 15 May 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus clavatus NRRL 1 (GenBank XP_001273603) all species
Class NRPKS (length: 1914) all classes   Class 24.NRPKS_III(6) in KS domain phylogeny Reliability putative
Product GeneName
UniProt,UniRef90 A1CCC0 , A1CCC0 UniRef50 A1CCC0
Domain by MAPSI KS-AT-ACP

(notation help / all patterns)

Domain by CDD (KS)-AT-(PP)-ME-(Aes)-(DAP2)

(notation help / all patterns)

Domain by ITER-DB KS-AT-ACP

(notation help / all patterns)

Estimated Domain KS-AT-PT-ACP-ME-TE
Description polyketide synthase-putative [Aspergillus clavatus NRRL 1]
Information KS, PP, Aes and DAP2 are incomplete from CDD identification.
References
  • Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012
Link 061390 AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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