PKS:ACLA 023380

From Metabolomics.JP
(Difference between revisions)
Jump to: navigation, search
m
Line 16: Line 16:
 
|information=equisetin synthetase-putative-45% - Equisetin biosynthesis. An iterative polyketide synthase-peptide synthetase hybrid assembles the HIV-1 integrase inhibitory tetramic acid-equisetin-in F. heterosporum. PMID: 15724180 acl1.278.m010508 7697 0.0 Fusarium heterosporum 3345 0.0 45% acl1.355.m000906 2643 0.0 38% afu2.3.m07106 2543 0.0 37% pca1.49.m08803 2243 0.0 aoa1.20192.m00277 2227 0.0 ana1.10153.m00165 2223 0.0-predicted by EVM2 similar to equisetin synthetase EqiS (GI:55823917) (Fusarium heterosporum) PMID: 15724180?
 
|information=equisetin synthetase-putative-45% - Equisetin biosynthesis. An iterative polyketide synthase-peptide synthetase hybrid assembles the HIV-1 integrase inhibitory tetramic acid-equisetin-in F. heterosporum. PMID: 15724180 acl1.278.m010508 7697 0.0 Fusarium heterosporum 3345 0.0 45% acl1.355.m000906 2643 0.0 38% afu2.3.m07106 2543 0.0 37% pca1.49.m08803 2243 0.0 aoa1.20192.m00277 2227 0.0 ana1.10153.m00165 2223 0.0-predicted by EVM2 similar to equisetin synthetase EqiS (GI:55823917) (Fusarium heterosporum) PMID: 15724180?
 
|length=3948
 
|length=3948
 +
|references=\*Schmitt.+2008$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Revision as of 16:40, 4 April 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Aspergillus clavatus NRRL 1 (GenBank XP_001269050) all species
Class NRPS-PKS (length: 3948) all classes   Class 30.NRPS-PKS_III(Equisetin-like) in KS domain phylogeny Reliability putative
Product equisetin GeneName
UniProt,UniRef90 A1CPQ3 , A1CPQ3 UniRef50 A1CPQ3
Domain by MAPSI KS-AT-DH-KR-ACP

(notation help / all patterns)

Domain by CDD KS-AT-DH-ME-KR-PP-Con-LuxE(AAA)-PP-KR

(notation help / all patterns)

Domain by ITER-DB {{{ITERDB}}}

(notation help / all patterns)

Estimated Domain
Description equisetin synthetase-putative [Aspergillus clavatus NRRL 1]
Information equisetin synthetase-putative-45% - Equisetin biosynthesis. An iterative polyketide synthase-peptide synthetase hybrid assembles the HIV-1 integrase inhibitory tetramic acid-equisetin-in F. heterosporum. PMID: 15724180 acl1.278.m010508 7697 0.0 Fusarium heterosporum 3345 0.0 45% acl1.355.m000906 2643 0.0 38% afu2.3.m07106 2543 0.0 37% pca1.49.m08803 2243 0.0 aoa1.20192.m00277 2227 0.0 ana1.10153.m00165 2223 0.0-predicted by EVM2 similar to equisetin synthetase EqiS (GI:55823917) (Fusarium heterosporum) PMID: 15724180?
References
  • Schmitt I, Kautz S, Lumbsch HT: 6-MSAS-like polyketide synthase genes occur in lichenized ascomycetes. Mycol Res 112:289-296, 2008
Link 023380 AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

Personal tools
Namespaces

Variants
Actions
Navigation
metabolites
Toolbox