PKS:Fung054

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(Add the anamorph name of Gibberella zeae, Fusarium graminearum.)
(Add two references, update ITERDB and Estimated domain inf.)
 
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{{{{NAMESPACE}}/Header}}
 
{{{{NAMESPACE}}/Header}}
 
{{PKSinfo
 
{{PKSinfo
|species=Fusarium graminearum
+
|species=Gibberella zeae
 
|taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomyceta; Pezizomycotina; Leotiomyceta; Sordariomyceta; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Gibberella
 
|taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomyceta; Pezizomycotina; Leotiomyceta; Sordariomyceta; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Gibberella
 
|product=aurofusarin  
 
|product=aurofusarin  
Line 8: Line 8:
 
|MAPSI=KS-AT-ACP-CYC
 
|MAPSI=KS-AT-ACP-CYC
 
|CDD=KS-AT-RPA-PP-TE
 
|CDD=KS-AT-RPA-PP-TE
 +
|ITERDB=KS-AT-ACP-CYC
 +
|InferredDomain=SAT-KS-AT-PT-ACP-TE/CLC
 
|class=NRPKS
 
|class=NRPKS
 
|reliability=identified
 
|reliability=identified
 
|description=type I polyketide synthase [Gibberella zeae]
 
|description=type I polyketide synthase [Gibberella zeae]
|information=ITRDB=KS-AT-ACP-CYC. Inferred domain architecture: SAT-KS-AT-PT-ACP-TE/CLC. Gibberella zeae is teleomorph of Fusarium graminearum
+
|information=Gibberella zeae is the teleomorph name of Fusarium graminearum
 
|length=2073
 
|length=2073
|references=\*Li.+2010$~\*Ahuja.+2012$~\*Malz.+2005$
+
|references=\*Li.+2010$~\*Ahuja.+2012$~\*Malz.+2005$2012$~\*Frandsen.+2006$~\*Frandsen.+2011$
 
}}
 
}}
 
{{{{NAMESPACE}}/Footer}}
 
{{{{NAMESPACE}}/Footer}}

Latest revision as of 00:16, 6 June 2012

Polyketide Top Species List UniRef90 Class UniRef50 Class Gene Class Domains
(by CDD)
Domains
(by MAPSI)
Gibberella zeae (GenBank AAU10633) all species
Class NRPKS (length: 2073) all classes   Class 15.NRPKS_I(8)Pigment-2 in KS domain phylogeny Reliability identified
Product aurofusarin GeneName pks12
UniProt,UniRef90 [1] , [2] UniRef50 [3]
Domain by MAPSI KS-AT-ACP-CYC

(notation help / all patterns)

Domain by CDD KS-AT-RPA-PP-TE

(notation help / all patterns)

Domain by ITER-DB KS-AT-ACP-CYC

(notation help / all patterns)

Estimated Domain SAT-KS-AT-PT-ACP-TE/CLC
Description type I polyketide synthase [Gibberella zeae]
Information Gibberella zeae is the teleomorph name of Fusarium graminearum
References
  • Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012
  • Frandsen RJ, Nielsen NJ, Maolanon N, Sorensen JC, Olsson S, Nielsen J, Giese H: The biosynthetic pathway for aurofusarin in Fusarium graminearum reveals a close link between the naphthoquinones and naphthopyrones, Mol Microbiol, 61(4): 1069-1080, 2006
  • Frandsen RJ, Schutt C, Lund BW, Staerk D, Nielsen J, Olsson S, Giese H: Two novel classes of enzymes are required for the biosynthesis of aurofusarin in Fusarium graminearum, J Biol Chem, 286(12): 10419-10428, 2011
  • Li Y, Image, II, Xu W, Image I, Tang Y: Classification, prediction, and verification of the regioselectivity of fungal polyketide synthase product template domains. J Biol Chem 285(30):22764-22773, 2010
Link AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

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