PKS:Aspni1:56896

Latest revision as of 15:29, 15 May 2012

Aspergillus niger ATCC 1015 (GenBank [1]) all species
Class	NRPKS (length: 2153) all classes Class in KS domain phylogeny	Reliability	identified
Product	naphtho-c-pyrone/DHN-melanin	GeneName	albAp
UniProt,UniRef90	[2] , [3]	UniRef50	[4]
Domain by MAPSI	KS-AT-ACP-ACP-CYC (notation help / all patterns)
Domain by CDD	AT-KS-AT-PP-PP-TE (notation help / all patterns)
Domain by ITER-DB	KS-AT-ACP-ACP-CYC (notation help / all patterns)
Estimated Domain	SAT-KS-AT-PT-ACP-ACP-TE/CLC
Description
Information	EHA28527.1 may be the corresponding GenBank ID of Aspni1:56896. An09g05730 in A. niger CBS 513.88 is one of homologous genes. Gene ID in Broad insitute=est_fge1_pm_C_110062
References	Ahuja M, Chiang YM, Chang SL, Praseuth MB, Entwistle R, Sanchez JF, Lo HC, Yeh HH, Oakley BR, Wang CC: Illuminating the diversity of aromatic polyketide synthases in aspergillus nidulans. J Am Chem Soc, 2012 Chiang YM, Meyer KM, Praseuth M, Baker SE, Bruno KS, Wang CC: Characterization of a polyketide synthase in aspergillus niger whose product is a precursor for both dihydroxynaphthalene (dhn) melanin and naphtho-gamma-pyrone. Fungal Genet Biol 48(4):430-437, 2011 Fisch KM, Gillaspy AF, Gipson M, Henrikson JC, Hoover AR, Jackson L, Najar FZ, Wagele H, Cichewicz RH: Chemical induction of silent biosynthetic pathway transcription in aspergillus niger. J Ind Microbiol Biotechnol 36(9):1199-1213, 2009
Link	AspGD

This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)

@@ Line 11: / Line 11: @@
 |MAPSI=KS-AT-ACP-ACP-CYC
 |CDD=AT-KS-AT-PP-PP-TE
+|ITERDB=KS-AT-ACP-ACP-CYC
+|InferredDomain=SAT-KS-AT-PT-ACP-ACP-TE/CLC
 |class=NRPKS
 |reliability=identified
 |description=
-|information=Possible GenBank ID= EHA28527.1; ITRDB=KS-AT-ACP-ACP-CYC.Possible domain architecture: SAT-KS-AT-PT-ACP-ACP-TE/CLC. Possibly be classified into NRPKS. An09g05730 in A. niger CBS 513.88 is one of homologous genes. http://fungicyc.broadinstitute.org/ANIG1/NEW-IMAGE?type=GENE&object=G4U-9291
+|information=EHA28527.1 may be the corresponding GenBank ID of Aspni1:56896. An09g05730 in A. niger CBS 513.88 is one of homologous genes. Gene ID in Broad insitute=[http://fungicyc.broadinstitute.org/ANIG1/NEW-IMAGE?type=GENE&object=G4U-9291 est_fge1_pm_C_110062]
 |length=2153
-|references=\*Chiang.+2011$~\*Fisch.+2009$
+|references=\*Chiang.+2011$~\*Fisch.+2009$~\*Ahuja.+2012$
 }}
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