PKS:Aspni1:191422
From Metabolomics.JP
(Difference between revisions)
(Created page with "{{{{NAMESPACE}}/Header}} {{PKSinfo |species=Aspergillus niger ATCC 1015 |taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomyceta; Pezizomycotina; Leotiomyceta; Eurotiomyce...") |
|||
| (2 intermediate revisions by one user not shown) | |||
| Line 3: | Line 3: | ||
|species=Aspergillus niger ATCC 1015 | |species=Aspergillus niger ATCC 1015 | ||
|taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomyceta; Pezizomycotina; Leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Emericella | |taxonomy=Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomyceta; Pezizomycotina; Leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Emericella | ||
| − | |product= | + | |product= |
|GenBank= | |GenBank= | ||
|UniProt= | |UniProt= | ||
|UniRef90= | |UniRef90= | ||
|UniRef50= | |UniRef50= | ||
| − | |geneName= | + | |geneName= |
|MAPSI=KS-AT-ACP-ACP-CYC | |MAPSI=KS-AT-ACP-ACP-CYC | ||
| − | |CDD= | + | |CDD=ME-KS-AT-PP-TE |
|ITERDB=KS-AT-ACP-ACP-CYC | |ITERDB=KS-AT-ACP-ACP-CYC | ||
|InferredDomain=SAT-KS-AT-PT-ACP-ACP-TE/CLC | |InferredDomain=SAT-KS-AT-PT-ACP-ACP-TE/CLC | ||
| Line 16: | Line 16: | ||
|reliability=identified | |reliability=identified | ||
|description= | |description= | ||
| − | |information= | + | |information=The corresponding GenBank ID isn't submitted yet. An03g05440 in A. niger CBS 513.88 is one of homologous genes. Gene ID in Broad insitute=[http://fungicyc.broadinstitute.org:1555/ANIG1/NEW-IMAGE?type=GENE-IN-CHROM-BROWSER&object=G4U-8084 e_gw1_14.257] |
|length=2121 | |length=2121 | ||
|references=\*Fisch.+2009$~\*Ahuja.+2012$ | |references=\*Fisch.+2009$~\*Ahuja.+2012$ | ||
}} | }} | ||
{{{{NAMESPACE}}/Footer}} | {{{{NAMESPACE}}/Footer}} | ||
Latest revision as of 02:44, 15 May 2012
| Polyketide Top | Species List | UniRef90 Class | UniRef50 Class | Gene Class | Domains (by CDD) |
Domains (by MAPSI) |
| Aspergillus niger ATCC 1015 (GenBank [1]) all species | |||
|---|---|---|---|
| Class | NRPKS (length: 2121) all classes Class in KS domain phylogeny | Reliability | identified |
| Product | GeneName | ||
| UniProt,UniRef90 | [2] , [3] | UniRef50 | [4] |
| Domain by MAPSI | KS-AT-ACP-ACP-CYC | ||
| Domain by CDD | ME-KS-AT-PP-TE | ||
| Domain by ITER-DB | KS-AT-ACP-ACP-CYC | ||
| Estimated Domain | SAT-KS-AT-PT-ACP-ACP-TE/CLC | ||
| Description | |||
| Information | The corresponding GenBank ID isn't submitted yet. An03g05440 in A. niger CBS 513.88 is one of homologous genes. Gene ID in Broad insitute=e_gw1_14.257 | ||
| References |
| ||
| Link | AspGD | ||
This work is performed by ShuHsi Lin (TW), Toshitaka Kumagai and Masanori Arita (JP)
